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CCDC12P1 CCDC12 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 100131852, updated on 10-Oct-2023

Summary

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Official Symbol
CCDC12P1provided by HGNC
Official Full Name
CCDC12 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:54595
See related
AllianceGenome:HGNC:54595
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
2p16.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (51926632..51927348, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (51922999..51923715, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (52153770..52154486, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene NRXN1 divergent transcript Neighboring gene lysine rich nucleolar protein 1 pseudogene 3 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:52018811-52019312 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:52019313-52019812 Neighboring gene crystallin gamma G, pseudogene Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:52118567-52119067 Neighboring gene uncharacterized LOC105374597 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:52281900-52282452 Neighboring gene zinc finger protein 863, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • coiled-coil domain containing 12 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_012227.1 

    Range
    101..817
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    51926632..51927348 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    51922999..51923715 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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