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PABPC1P5 poly(A) binding protein cytoplasmic 1 pseudogene 5 [ Homo sapiens (human) ]

Gene ID: 100131374, updated on 10-Oct-2023

Summary

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Official Symbol
PABPC1P5provided by HGNC
Official Full Name
poly(A) binding protein cytoplasmic 1 pseudogene 5provided by HGNC
Primary source
HGNC:HGNC:37985
See related
AllianceGenome:HGNC:37985
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
Yq11.21
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) Y NC_000024.10 (11336403..11337109)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) Y NC_060948.1 (11557753..11558459)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) Y NC_000024.9 (13492079..13492785)

Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrY:13481354-13482029 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrY:13482030-13482704 Neighboring gene double homeobox 4 like 18 (pseudogene) Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:13483089-13483606 Neighboring gene NANOG hESC enhancer GRCh37_chrY:13483918-13484419 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:13485338-13485872 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrY:13488397-13488934 Neighboring gene double homeobox 4 like 19 (pseudogene) Neighboring gene solute carrier family 9 member B1 pseudogene 1 Neighboring gene ACTR3B pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022964.1 

    Range
    101..807
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000024.10 Reference GRCh38.p14 Primary Assembly

    Range
    11336403..11337109
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060948.1 Alternate T2T-CHM13v2.0

    Range
    11557753..11558459
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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