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THAP12P9 THAP domain containing 12 pseudogene 9 [ Homo sapiens (human) ]

Gene ID: 100131309, updated on 10-Oct-2023

Summary

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Official Symbol
THAP12P9provided by HGNC
Official Full Name
THAP domain containing 12 pseudogene 9provided by HGNC
Primary source
HGNC:HGNC:39573
See related
AllianceGenome:HGNC:39573
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PRKRIRP9
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Genomic context

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See THAP12P9 in Genome Data Viewer
Location:
4p12
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (45323745..45324751, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (45292781..45293787, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (45325762..45326768, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124900850 Neighboring gene HERV-FRD provirus ancestral Env polyprotein pseudogene Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr4:45066447-45067646 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21528 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:45285063-45285564 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:45285565-45286064 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:45301595-45301826 Neighboring gene ribosomal protein L4 pseudogene Neighboring gene RNA, U6 small nuclear 931, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) pseudogene 9

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022010.2 

    Range
    101..1107
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    45323745..45324751 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    45292781..45293787 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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