U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

HNRNPA1P13 heterogeneous nuclear ribonucleoprotein A1 pseudogene 13 [ Homo sapiens (human) ]

Gene ID: 100131130, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
HNRNPA1P13provided by HGNC
Official Full Name
heterogeneous nuclear ribonucleoprotein A1 pseudogene 13provided by HGNC
Primary source
HGNC:HGNC:39131
See related
AllianceGenome:HGNC:39131
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See HNRNPA1P13 in Genome Data Viewer
Location:
5q31.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (136428832..136430054)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (136951337..136952559)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (135764521..135765743)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene TRPC7 antisense RNA 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:135586892-135587392 Neighboring gene transient receptor potential cation channel subfamily C member 7 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23180 Neighboring gene uncharacterized LOC124901075 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr5:135717435-135718266 Neighboring gene heat shock protein family D (Hsp60) member 1 pseudogene 18 Neighboring gene uncharacterized LOC124901076 Neighboring gene MPRA-validated peak5484 silencer Neighboring gene MED14-independent group 3 enhancer GRCh37_chr5:135880336-135881535 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr5:135887367-135887882 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:135900628-135901278 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:135901279-135901929 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16380 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:136021270-136021774 Neighboring gene uncharacterized CTB-1I21.1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Integrated genomic analysis implicates haploinsufficiency of multiple chromosome 5q31.2 genes in de novo myelodysplastic syndromes pathogenesis. Graubert TA, et al. PLoS One, 2009. PMID 19240791, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Observational study of gene-disease association. (HuGE Navigator)
    Title: Integrated genomic analysis implicates haploinsufficiency of multiple chromosome 5q31.2 genes in de novo myelodysplastic syndromes pathogenesis.
Submit: New GeneRIF Correction

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_021898.2 

    Range
    101..1323
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    136428832..136430054
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    136951337..136952559
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials