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RPL15P22 ribosomal protein L15 pseudogene 22 [ Homo sapiens (human) ]

Gene ID: 100130624, updated on 10-Oct-2023

Summary

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Official Symbol
RPL15P22provided by HGNC
Official Full Name
ribosomal protein L15 pseudogene 22provided by HGNC
Primary source
HGNC:HGNC:36933
See related
AllianceGenome:HGNC:36933
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL15_10_1742
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Genomic context

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Location:
22q12.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (26886854..26887577, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (27347809..27348532, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (27282817..27283540, complement)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:27076707-27077531 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:27077532-27078355 Neighboring gene myocardial infarction associated transcript Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr22:27085634-27086255 Neighboring gene MIAT neighbor Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18798 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18799 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:27146977-27147974 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:27147975-27148973 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:27148974-27149971 Neighboring gene Sharpr-MPRA regulatory region 13066 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr22:27179387-27180586 Neighboring gene Sharpr-MPRA regulatory region 7329 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:27196413-27196924 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18800 Neighboring gene Sharpr-MPRA regulatory region 5469 Neighboring gene uncharacterized LOC110091768 Neighboring gene long intergenic non-protein coding RNA 1422 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18801 Neighboring gene uncharacterized LOC107985582

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010342.4 

    Range
    101..824
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    26886854..26887577 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    27347809..27348532 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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