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CBX1P4 chromobox 1 pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 100130461, updated on 10-Oct-2023

Summary

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Official Symbol
CBX1P4provided by HGNC
Official Full Name
chromobox 1 pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:38658
See related
AllianceGenome:HGNC:38658
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
Xp22.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (17282351..17284552)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (16864950..16867151)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (17300474..17302675)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene RALBP1 associated Eps domain containing 2 Neighboring gene uncharacterized LOC124905252 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:17192464-17192964 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:17192965-17193465 Neighboring gene high mobility group nucleosomal binding domain 2 pseudogene 45 Neighboring gene small nucleolar RNA U13 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:17403909-17404450 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:17427751-17428292 Neighboring gene NHS actin remodeling regulator Neighboring gene microRNA 4768

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • chromobox homolog 1 (HP1 beta homolog Drosophila ) pseudogene
  • chromobox homolog 1 pseudogene 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_007646.3 

    Range
    101..2302
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    17282351..17284552
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    16864950..16867151
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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