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PGAM1P13 phosphoglycerate mutase 1 pseudogene 13 [ Homo sapiens (human) ]

Gene ID: 100129815, updated on 10-Oct-2023

Summary

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Official Symbol
PGAM1P13provided by HGNC
Official Full Name
phosphoglycerate mutase 1 pseudogene 13provided by HGNC
Primary source
HGNC:HGNC:42461
See related
Ensembl:ENSG00000248838 AllianceGenome:HGNC:42461
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
8q23.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (107647280..107648033)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (108775818..108776571)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (108659508..108660261)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene high mobility group box 1 pseudogene 46 Neighboring gene uncharacterized LOC124902067 Neighboring gene MPRA-validated peak7142 silencer Neighboring gene angiopoietin 1 Neighboring gene MPRA-validated peak7143 silencer Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:108441063-108441564 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:108441565-108442064 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:108452124-108452320 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:108456962-108457507 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:108457806-108458328 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:108458329-108458849 Neighboring gene MPRA-validated peak7144 silencer Neighboring gene uncharacterized LOC105375703 Neighboring gene RNA, 5S ribosomal pseudogene 275

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022429.1 

    Range
    101..854
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    107647280..107648033
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    108775818..108776571
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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