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HAX1P1 HAX1 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 100129661, updated on 10-Oct-2023

Summary

Official Symbol
HAX1P1provided by HGNC
Official Full Name
HAX1 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:55151
See related
AllianceGenome:HGNC:55151
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

Location:
Xq28
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (148197832..148198973, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (146464212..146465353, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (147279352..147280493, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene RNA, 5S ribosomal pseudogene 524 Neighboring gene FMR1 neighbor Neighboring gene ferritin heavy chain 1 pseudogene 8 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 30008 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:147507788-147508643 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:147522255-147522928 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:147522929-147523603 Neighboring gene origin of replication in 5' region of AFF2/FMR2 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:147582797-147583674 Neighboring gene RPL7L1 pseudogene 11 Neighboring gene MED14-independent group 3 enhancer GRCh37_chrX:147636485-147637684 Neighboring gene fragile site, folic acid type, rare, fra(X)(q28) E Neighboring gene ATAC-STARR-seq lymphoblastoid active region 30009 Neighboring gene ALF transcription elongation factor 2 Neighboring gene RN7SK pseudogene 267

Genomic regions, transcripts, and products

Phenotypes

EBI GWAS Catalog

Description
Acetaminophen-NAPQI hepatotoxicity: a cell line model system genome-wide association study.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022646.3 

    Range
    101..1242
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    148197832..148198973 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    146464212..146465353 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)