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SETP8 SET pseudogene 8 [ Homo sapiens (human) ]

Gene ID: 100128536, updated on 10-Oct-2023

Summary

Official Symbol
SETP8provided by HGNC
Official Full Name
SET pseudogene 8provided by HGNC
Primary source
HGNC:HGNC:42927
See related
AllianceGenome:HGNC:42927
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

Location:
Xq23
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (116963049..116963865)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (115339628..115340444)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (116097017..116097833)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:115946212-115946988 Neighboring gene uncharacterized LOC100126447 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chrX:115950867-115951670 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:115951671-115952473 Neighboring gene RNA, U6 small nuclear 1323, pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:116065040-116065548 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:116065549-116066057 Neighboring gene Sharpr-MPRA regulatory region 1920 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chrX:116381582-116382781 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:116414963-116415464 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:116415465-116415964 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:116438886-116439386 Neighboring gene TCERG1 pseudogene 1 Neighboring gene Sharpr-MPRA regulatory region 7314 Neighboring gene kelch like family member 13 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:117166141-117166641

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022693.2 

    Range
    101..917
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    116963049..116963865
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    115339628..115340444
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)