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DPPA2P2 developmental pluripotency associated 2 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 100128503, updated on 10-Oct-2023

Summary

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Official Symbol
DPPA2P2provided by HGNC
Official Full Name
developmental pluripotency associated 2 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:44627
See related
AllianceGenome:HGNC:44627
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
1p36.11
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (26519117..26520264, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (26357069..26358216, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (26845608..26846755, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene dehydrodolichyl diphosphate synthase subunit Neighboring gene DHDDS antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:26797538-26798246 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:26798247-26798956 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 478 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 479 Neighboring gene MPRA-validated peak134 silencer Neighboring gene high mobility group nucleosomal binding domain 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 480 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 481 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:26827864-26828521 Neighboring gene CRISPRi-validated cis-regulatory element chr1.3789 Neighboring gene uncharacterized LOC124903884 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 482 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:26856858-26857768 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:26857769-26858680 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 506 Neighboring gene ribosomal protein S6 kinase A1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 507 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 508 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 483 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:26868826-26869470 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 509 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 484 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 510 Neighboring gene microRNA 1976

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_012273.1 

    Range
    101..1248
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    26519117..26520264 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_009646195.1 Reference GRCh38.p14 PATCHES

    Range
    6735..7882 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    26357069..26358216 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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