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GVINP2 GTPase, very large interferon inducible pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 100128135, updated on 10-Oct-2023

Summary

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Official Symbol
GVINP2provided by HGNC
Official Full Name
GTPase, very large interferon inducible pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:38876
See related
Ensembl:ENSG00000254781 AllianceGenome:HGNC:38876
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
11p15.4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (6748125..6750369)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (6806569..6808813)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (6769356..6771600)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene NANOG hESC enhancer GRCh37_chr11:6711804-6712353 Neighboring gene uncharacterized LOC124902625 Neighboring gene GTPase, very large interferon inducible pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4356 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4357 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4358 Neighboring gene olfactory receptor family 2 subfamily AG member 2 Neighboring gene olfactory receptor family 2 subfamily AG member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The evolutionarily dynamic IFN-inducible GTPase proteins play conserved immune functions in vertebrates and cephalochordates. Li G, et al. Mol Biol Evol, 2009 Jul. PMID 19369598

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_028988.1 

    Range
    101..2345
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    6748125..6750369
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    6806569..6808813
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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