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Trbv27 T cell receptor beta variable 27 [ Mus musculus (house mouse) ]

Gene ID: 100124693, updated on 8-Feb-2024

Summary

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Official Symbol
Trbv27provided by MGI
Official Full Name
T cell receptor beta variable 27provided by MGI
Primary source
MGI:MGI:5009970
See related
IMGT/GENE-DB:trbv27; AllianceGenome:MGI:5009970
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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Genomic context

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See Trbv27 in Genome Data Viewer
Location:
6 B1; 6 19.36 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (41235055..41235513)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (41258121..41258579)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene T cell receptor beta chain Neighboring gene STARR-seq mESC enhancer starr_15695 Neighboring gene T cell receptor beta, variable 26 Neighboring gene protein tyrosine phosphatase domain containing 1 pseudogene Neighboring gene T cell receptor beta variable 28 Neighboring gene T cell receptor beta variable 29

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential transcriptional regulation of individual TCR V beta segments before gene rearrangement. Chen F, et al. J Immunol, 2001 Feb 1. PMID 11160223

GeneRIFs: Gene References Into Functions

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_006980.1 

    Range
    367327..367785
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    41235055..41235513
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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