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Trdv4 T cell receptor delta variable 4 [ Mus musculus (house mouse) ]

Gene ID: 100114901, updated on 8-Feb-2024

Summary

Official Symbol
Trdv4provided by MGI
Official Full Name
T cell receptor delta variable 4provided by MGI
Primary source
MGI:MGI:4887419
See related
Ensembl:ENSMUSG00000076867 IMGT/GENE-DB:TRDV4; AllianceGenome:MGI:4887419
Gene type
other
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to enable antigen binding activity and immunoglobulin receptor binding activity. Predicted to be involved in several processes, including activation of immune response; defense response to other organism; and phagocytosis. Predicted to be part of immunoglobulin complex, circulating. Predicted to be active in external side of plasma membrane. Orthologous to human TRDV2 (T cell receptor delta variable 2). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:
14 C2; 14 27.64 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (54312461..54312972)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (54075004..54075515)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene T cell receptor alpha chain Neighboring gene predicted gene, 30392 Neighboring gene STARR-positive B cell enhancer ABC_E3113 Neighboring gene STARR-seq mESC enhancer starr_36723 Neighboring gene T cell receptor alpha variable 23 Neighboring gene T cell receptor delta chain Neighboring gene T cell receptor delta variable 3 Neighboring gene predicted gene, 30275 Neighboring gene T cell receptor delta diversity 1 Neighboring gene T cell receptor delta diversity 2

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by MGI

Process Evidence Code Pubs
involved_in immune response IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in immunoglobulin production IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_007044.1 

    Range
    1647538..1648049
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    54312461..54312972
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)