GTF2IP4 general transcription factor IIi pseudogene 4 [Homo sapiens (human)] - Gene

Summary

Official Symbol: GTF2IP4provided by HGNC
Official Full Name: general transcription factor IIi pseudogene 4provided by HGNC
Primary source: HGNC:HGNC:51716
See related: Ensembl:ENSG00000293241 AllianceGenome:HGNC:51716
Gene type: pseudo
RefSeq status: VALIDATED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as: GTF2I
Expression: Ubiquitous expression in brain (RPKM 129.8), thyroid (RPKM 92.9) and 25 other tissues See more
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Genomic context

Location:: 7q11.23

Exon count:: 24

Annotation release	Status	Assembly	Chr	Location
RS_2023_10	current	GRCh38.p14 (GCF_000001405.40)	7	NC_000007.14 (73154924..73207296)
RS_2023_10	current	T2T-CHM13v2.0 (GCF_009914755.1)	7	NC_060931.1 (74355085..74407502)
105.20220307	previous assembly	GRCh37.p13 (GCF_000001405.25)	7	NC_000007.13 (72569012..72621336)

Chromosome 7 - NC_000007.14 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: HPA RNA-seq normal tissues
Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
BioProject: PRJEB4337
Publication: PMID 24309898
Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

A002V48 (e-PCR)
- UniSTS:17169

D7S2071E (e-PCR)
- UniSTS:9240

D7S2123E (e-PCR)
- UniSTS:848

D7S3197 (e-PCR)
- UniSTS:229479

IB386 (e-PCR)
- UniSTS:14452

G33157 (e-PCR)
- UniSTS:60071

IB291 (e-PCR)
- UniSTS:64433

G31029 (e-PCR)
- UniSTS:62409

Other Names

general transcription factor II, i, pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.