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Gm28269 predicted gene 28269 [ Mus musculus (house mouse) ]

Gene ID: 100043180, updated on 8-Feb-2024

Summary

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Official Symbol
Gm28269provided by MGI
Official Full Name
predicted gene 28269provided by MGI
Primary source
MGI:MGI:5578975
See related
Ensembl:ENSMUSG00000101818 AllianceGenome:MGI:5578975
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm4281
Expression
Restricted expression toward testis adult (RPKM 16.2) See more
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Genomic context

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Location:
X A2; X
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (21609673..21611350, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (21743434..21745111, complement)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene STARR-seq mESC enhancer starr_46900 Neighboring gene STARR-seq mESC enhancer starr_46902 Neighboring gene STARR-seq mESC enhancer starr_46903 Neighboring gene solute carrier family 6 (neurotransmitter transporter), member 14 Neighboring gene STARR-seq mESC enhancer starr_46904 Neighboring gene STARR-seq mESC enhancer starr_46905 Neighboring gene predicted gene, 24535 Neighboring gene STARR-seq mESC enhancer starr_46906 Neighboring gene STARR-seq mESC enhancer starr_46907 Neighboring gene STARR-seq mESC enhancer starr_46908 Neighboring gene STARR-seq mESC enhancer starr_46909 Neighboring gene predicted gene 14563

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_163859.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL807250
    Related
    ENSMUST00000189511.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    21609673..21611350 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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