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Rpsa-ps3 ribosomal protein SA, pseudogene 3 [ Mus musculus (house mouse) ]

Gene ID: 100042146, updated on 8-Feb-2024

Summary

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Official Symbol
Rpsa-ps3provided by MGI
Official Full Name
ribosomal protein SA, pseudogene 3provided by MGI
Primary source
MGI:MGI:3652081
See related
Ensembl:ENSMUSG00000083580 AllianceGenome:MGI:3652081
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm12049
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Genomic context

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Location:
11 A3.2; 11 14.16 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (22336292..22338198)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (22386292..22388198)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 51938 Neighboring gene EH domain binding protein 1 Neighboring gene STARR-seq mESC enhancer starr_28857 Neighboring gene STARR-positive B cell enhancer ABC_E584 Neighboring gene predicted gene, 53674 Neighboring gene STARR-seq mESC enhancer starr_28858 Neighboring gene DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_28859 Neighboring gene STARR-seq mESC enhancer starr_28860 Neighboring gene STARR-seq mESC enhancer starr_28862 Neighboring gene STARR-seq mESC enhancer starr_28863 Neighboring gene STARR-seq mESC enhancer starr_28864 Neighboring gene STARR-seq mESC enhancer starr_28865 Neighboring gene STARR-seq mESC enhancer starr_28866 Neighboring gene predicted gene, 46274 Neighboring gene transmembrane protein 17

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual annotation and analysis of the defensin gene cluster in the C57BL/6J mouse reference genome. Amid C, et al. BMC Genomics, 2009 Dec 15. PMID 20003482, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • ribosomal protein SA pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011950.2 

    Range
    101..2007
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    22336292..22338198
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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