U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Gal3st2b galactose-3-O-sulfotransferase 2B [ Mus musculus (house mouse) ]

Gene ID: 100041596, updated on 8-Feb-2024

Summary

Go to the top of the page Help
Official Symbol
Gal3st2bprovided by MGI
Official Full Name
galactose-3-O-sulfotransferase 2Bprovided by MGI
Primary source
MGI:MGI:3711964
See related
Ensembl:ENSMUSG00000093805 AllianceGenome:MGI:3711964
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm988; Gm9994; Gal3st2; Gal3ST-2
Expression
Biased expression in duodenum adult (RPKM 41.6), small intestine adult (RPKM 39.0) and 2 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Gal3st2b in Genome Data Viewer
Location:
1 D; 1 47.41 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (93846159..93870367)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (93918437..93942645)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene galactose-3-O-sulfotransferase 2 Neighboring gene STARR-seq mESC enhancer starr_01736 Neighboring gene STARR-seq mESC enhancer starr_01737 Neighboring gene STARR-seq mESC enhancer starr_01738 Neighboring gene D-2-hydroxyglutarate dehydrogenase pseudogene Neighboring gene D-2-hydroxyglutarate dehydrogenase pseudogene Neighboring gene galactose-3-O-sulfotransferase 2C

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Porcine, mouse and human galactose 3-O-sulphotransferase-2 enzymes have different substrate specificities; the porcine enzyme requires basic compounds for its catalytic activity. Seko A, et al. Biochem J, 2005 Oct 1. PMID 15926885, Free PMC Article
  2. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article

GeneRIFs: Gene References Into Functions

Variation

Go to the top of the page Help

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
enables sulfotransferase activity ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

Go to the top of the page Help
Preferred Names
galactose-3-O-sulfotransferase 2
Names
beta-galactose-3-O-sulfotransferase 2
gal-beta-1, 3-GalNAc 3'-sulfotransferase 2
NP_001192178.1
XP_006529115.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001205249.1 → NP_001192178.1  galactose-3-O-sulfotransferase 2

    See identical proteins and their annotated locations for NP_001192178.1

    Status: PROVISIONAL

    Source sequence(s)
    AY216522
    Consensus CDS
    CCDS56641.1
    UniProtKB/Swiss-Prot
    Q6XQH0
    UniProtKB/TrEMBL
    Q3UN22
    Related
    ENSMUSP00000136012.2, ENSMUST00000178757.8
    Conserved Domains (1) summary
    cl22970
    Location:11 → 380
    Sulfotransfer_2; Sulfotransferase family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    93846159..93870367
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006529052.3 → XP_006529115.1  galactose-3-O-sulfotransferase 2 isoform X1

    UniProtKB/TrEMBL
    J3QMJ1, Q3UN22
    Related
    ENSMUSP00000136311.2, ENSMUST00000177958.2
    Conserved Domains (1) summary
    cl22970
    Location:1 → 382
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6XQH0.1 GenPept UniProtKB/Swiss-Prot:Q6XQH0

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools
Miscellaneous