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Mirg miRNA containing gene [ Mus musculus (house mouse) ]

Gene ID: 100040724, updated on 20-Feb-2024

Summary

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Official Symbol
Mirgprovided by MGI
Official Full Name
miRNA containing geneprovided by MGI
Primary source
MGI:MGI:3781106
See related
Ensembl:ENSMUSG00000097391 AllianceGenome:MGI:3781106
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Meg9; Gm2928; mir-410; 2810474H01Rik
Summary
Is expressed in several structures, including central nervous system; embryo mesenchyme; future brain; limb bud; and musculature. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in limb E14.5 (RPKM 109.1), placenta adult (RPKM 33.9) and 13 other tissues See more
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Genomic context

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Location:
12 F1; 12 60.56 cM
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (109701415..109715892)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (109734981..109749458)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene microRNA 485 Neighboring gene microRNA 668 Neighboring gene microRNA 453 Neighboring gene microRNA 496a Neighboring gene microRNA 154 Neighboring gene microRNA 377 Neighboring gene microRNA 541 Neighboring gene microRNA 412 Neighboring gene microRNA 369 Neighboring gene microRNA 409 Neighboring gene microRNA 410 Neighboring gene microRNA 3072 Neighboring gene STARR-seq mESC enhancer starr_33269 Neighboring gene ribosomal protein L3 pseudogene Neighboring gene STARR-seq mESC enhancer starr_33270 Neighboring gene STARR-positive B cell enhancer mm9_chr12:111095008-111095309 Neighboring gene ribosomal protein 10 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Spatiotemporal expression pattern of Mirg, an imprinted non-coding gene, during mouse embryogenesis. Han Z, et al. J Mol Histol, 2012 Feb. PMID 22033866
  2. Hypermethylation and reduced expression of Gtl2, Rian and Mirg at the Dlk1-Dio3 imprinted locus as a marker for poor developmental potential of mouse embryonic stem cells. Schacker M, et al. Stem Cell Res, 2020 Oct. PMID 32822966, Free PMC Article
  3. Epigenetic changes induced by in utero dietary challenge result in phenotypic variability in successive generations of mice. Van de Pette M, et al. Nat Commun, 2022 May 5. PMID 35513363, Free PMC Article
  4. Imprinted microRNA genes transcribed antisense to a reciprocally imprinted retrotransposon-like gene. Seitz H, et al. Nat Genet, 2003 Jul. PMID 12796779
  5. Efficient production and transmission of CRISPR/Cas9-mediated mutant alleles at the IG-DMR via generation of mosaic mice using a modified 2CC method. Hara S, et al. Sci Rep, 2019 Dec 27. PMID 31882978, Free PMC Article

See all (38) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Potential roles for lncRNA Mirg/Foxp1 in an ARHL model created using C57BL/6J mice.
    Title: Potential roles for lncRNA Mirg/Foxp1 in an ARHL model created using C57BL/6J mice.
  2. Hypermethylation and reduced expression of Gtl2, Rian and Mirg at the Dlk1-Dio3 imprinted locus as a marker for poor developmental potential of mouse embryonic stem cells.
    Title: Hypermethylation and reduced expression of Gtl2, Rian and Mirg at the Dlk1-Dio3 imprinted locus as a marker for poor developmental potential of mouse embryonic stem cells.
Submit: New GeneRIF Correction

General gene information

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Markers

Gene Ontology Provided by MGI

Process Evidence Code Pubs
involved_in chromatin organization IDA
Inferred from Direct Assay
more info
 PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_028265.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AI605771, AJ517767, BF465610
    Related
    ENSMUST00000181543.9

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    109701415..109715892
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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