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Gm10634 predicted gene 10634 [ Mus musculus (house mouse) ]

Gene ID: 100039674, updated on 8-Feb-2024

Summary

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Official Symbol
Gm10634provided by MGI
Official Full Name
predicted gene 10634provided by MGI
Primary source
MGI:MGI:3641833
See related
AllianceGenome:MGI:3641833
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 11.1) See more
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Genomic context

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See Gm10634 in Genome Data Viewer
Location:
9 E3.1; 9 47.24 cM
Exon count:
35
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (88601701..88712971)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (88719648..88830918)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 26567 Neighboring gene predicted gene 29415 Neighboring gene predicted gene, 53509 Neighboring gene STARR-seq mESC enhancer starr_24858 Neighboring gene 5, 10-methenyltetrahydrofolate synthetase-like Neighboring gene STARR-seq mESC enhancer starr_24859 Neighboring gene STARR-positive B cell enhancer ABC_E3851 Neighboring gene STARR-positive B cell enhancer ABC_E10574 Neighboring gene STARR-positive B cell enhancer mm9_chr9:88626551-88626852 Neighboring gene STARR-seq mESC enhancer starr_24860 Neighboring gene B cell leukemia/lymphoma 2 related protein A1d Neighboring gene STARR-seq mESC enhancer starr_24861 Neighboring gene STARR-seq mESC enhancer starr_24862 Neighboring gene predicted gene, 53511 Neighboring gene predicted gene, 26082 Neighboring gene STARR-seq mESC enhancer starr_24863 Neighboring gene RIKEN cDNA 9330159M07 gene Neighboring gene tripartite motif-containing 43C Neighboring gene transcription elongation factor B polypeptide 1 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC100039674

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001384246.1 → NP_001371175.1  uncharacterized protein LOC100039674

    Status: VALIDATED

    Source sequence(s)
    CT030651, CT030710

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    88601701..88712971
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035096917.1 → XP_034952808.1  uncharacterized protein LOC100039674 isoform X13

  2. XM_035096913.1 → XP_034952804.1  uncharacterized protein LOC100039674 isoform X13

  3. XM_036154478.1 → XP_036010371.1  uncharacterized protein LOC100039674 isoform X17

  4. XM_035096918.2 → XP_034952809.1  uncharacterized protein LOC100039674 isoform X13

  5. XM_035096912.1 → XP_034952803.1  uncharacterized protein LOC100039674 isoform X13

  6. XM_035096916.1 → XP_034952807.1  uncharacterized protein LOC100039674 isoform X13

  7. XM_035096915.1 → XP_034952806.1  uncharacterized protein LOC100039674 isoform X13

  8. XM_035096914.2 → XP_034952805.1  uncharacterized protein LOC100039674 isoform X13

  9. XM_036154473.1 → XP_036010366.1  uncharacterized protein LOC100039674 isoform X13

  10. XM_036154474.1 → XP_036010367.1  uncharacterized protein LOC100039674 isoform X13

  11. XM_036154480.1 → XP_036010373.1  uncharacterized protein LOC100039674 isoform X19

    UniProtKB/TrEMBL
    Q8CDN2

  12. XM_036154482.1 → XP_036010375.1  uncharacterized protein LOC100039674 isoform X19

    UniProtKB/TrEMBL
    Q8CDN2

  13. XM_035096906.2 → XP_034952797.1  uncharacterized protein LOC100039674 isoform X1

  14. XM_036154465.1 → XP_036010358.1  uncharacterized protein LOC100039674 isoform X7

  15. XM_035096907.2 → XP_034952798.1  uncharacterized protein LOC100039674 isoform X3

  16. XM_035096908.2 → XP_034952799.1  uncharacterized protein LOC100039674 isoform X4

  17. XM_036154471.1 → XP_036010364.1  uncharacterized protein LOC100039674 isoform X12

  18. XM_036154470.1 → XP_036010363.1  uncharacterized protein LOC100039674 isoform X11

  19. XM_036154467.1 → XP_036010360.1  uncharacterized protein LOC100039674 isoform X8

  20. XM_035096909.2 → XP_034952800.1  uncharacterized protein LOC100039674 isoform X5

  21. XM_036154476.1 → XP_036010369.1  uncharacterized protein LOC100039674 isoform X15

  22. XM_036154475.1 → XP_036010368.1  uncharacterized protein LOC100039674 isoform X14

  23. XM_036154483.1 → XP_036010376.1  uncharacterized protein LOC100039674 isoform X20

    UniProtKB/TrEMBL
    Q8CDN2

  24. XM_036154485.1 → XP_036010378.1  uncharacterized protein LOC100039674 isoform X20

    UniProtKB/TrEMBL
    Q8CDN2

  25. XM_036154486.1 → XP_036010379.1  uncharacterized protein LOC100039674 isoform X20

    UniProtKB/TrEMBL
    Q8CDN2

  26. XM_036154484.1 → XP_036010377.1  uncharacterized protein LOC100039674 isoform X20

    UniProtKB/TrEMBL
    Q8CDN2

  27. XM_036154487.1 → XP_036010380.1  uncharacterized protein LOC100039674 isoform X20

    UniProtKB/TrEMBL
    Q8CDN2

  28. XM_036154477.1 → XP_036010370.1  uncharacterized protein LOC100039674 isoform X16

  29. XM_035096911.2 → XP_034952802.1  uncharacterized protein LOC100039674 isoform X13

  30. XM_036154479.1 → XP_036010372.1  uncharacterized protein LOC100039674 isoform X18

  31. XM_036154468.1 → XP_036010361.1  uncharacterized protein LOC100039674 isoform X9

  32. XM_035096910.2 → XP_034952801.1  uncharacterized protein LOC100039674 isoform X6

  33. XM_036154469.1 → XP_036010362.1  uncharacterized protein LOC100039674 isoform X10

  34. XM_036154464.1 → XP_036010357.1  uncharacterized protein LOC100039674 isoform X2

  35. XM_036154481.1 → XP_036010374.1  uncharacterized protein LOC100039674 isoform X19

    UniProtKB/TrEMBL
    Q8CDN2

  36. XM_036154463.1 → XP_036010356.1  uncharacterized protein LOC100039674 isoform X2

  37. XM_036154466.1 → XP_036010359.1  uncharacterized protein LOC100039674 isoform X7

  38. XM_036154472.1 → XP_036010365.1  uncharacterized protein LOC100039674 isoform X12

  39. XM_036154488.1 → XP_036010381.1  uncharacterized protein LOC100039674 isoform X20

    UniProtKB/TrEMBL
    Q8CDN2
Nucleotide Protein Strain
Heading Accession and Version

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