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Mup9 major urinary protein 9 [ Mus musculus (house mouse) ]

Gene ID: 100038948, updated on 8-Feb-2024

Summary

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Official Symbol
Mup9provided by MGI
Official Full Name
major urinary protein 9provided by MGI
Primary source
MGI:MGI:3782918
See related
Ensembl:ENSMUSG00000078686 AllianceGenome:MGI:3782918
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Mup2; Mup6; Gm14076
Summary
Predicted to be located in extracellular space. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward liver adult (RPKM 2042.0) See more
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Genomic context

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Location:
4 B3; 4 32.84 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (60374045..60378084, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (60418046..60422085, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene major urinary protein, pseudogene 29 Neighboring gene major urinary protein, pseudogene 28 Neighboring gene STARR-seq mESC enhancer starr_10397 Neighboring gene major urinary protein, pseudogene 4 Neighboring gene major urinary protein, pseudogene 26

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Species specificity in major urinary proteins by parallel evolution. Logan DW, et al. PLoS One, 2008 Sep 25. PMID 18815613, Free PMC Article
  2. Identification of protein pheromones that promote aggressive behaviour. Chamero P, et al. Nature, 2007 Dec 6. PMID 18064011
  3. Update on the human and mouse lipocalin (LCN) gene family, including evidence the mouse Mup cluster is result of an "evolutionary bloom". Charkoftaki G, et al. Hum Genomics, 2019 Feb 19. PMID 30782214, Free PMC Article

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
major urinary protein 6
Names
Alpha-2U-globulin
Group 1, BS6
MUP 6
major urinary protein 2
major urinary protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001281979.1 → NP_001268908.1  major urinary protein 6 precursor

    See identical proteins and their annotated locations for NP_001268908.1

    Status: VALIDATED

    Source sequence(s)
    CT571246
    Consensus CDS
    CCDS51187.2
    UniProtKB/Swiss-Prot
    P02762, P11589, P70119, Q78EF5, Q91V46, Q99JF6
    UniProtKB/TrEMBL
    A2CGB6, B5TE76
    Related
    ENSMUSP00000113741.2, ENSMUST00000122381.8
    Conserved Domains (1) summary
    cd19428
    Location:23 → 180
    lipocalin_MUP-like; major urinary proteins (MUPs) and similar proteins

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    60374045..60378084 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006537480.3 → XP_006537543.1  major urinary protein 6 isoform X1

    See identical proteins and their annotated locations for XP_006537543.1

    UniProtKB/TrEMBL
    A9C496
    Related
    ENSMUSP00000113461.2, ENSMUST00000118759.8
    Conserved Domains (1) summary
    cd19428
    Location:23 → 172
    lipocalin_MUP-like; major urinary proteins (MUPs) and similar proteins

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001126319.1: Suppressed sequence

    Description
    NM_001126319.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P02762.2 GenPept UniProtKB/Swiss-Prot:P02762

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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