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Tmem51os1 Tmem51 opposite strand 1 [ Mus musculus (house mouse) ]

Gene ID: 100038693, updated on 8-Feb-2024

Summary

Official Symbol
Tmem51os1provided by MGI
Official Full Name
Tmem51 opposite strand 1provided by MGI
Primary source
MGI:MGI:3642733
See related
Ensembl:ENSMUSG00000073728 AllianceGenome:MGI:3642733
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm10565; Tmem51as1
Expression
Broad expression in colon adult (RPKM 1.4), stomach adult (RPKM 1.3) and 24 other tissues See more
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Genomic context

See Tmem51os1 in Genome Data Viewer
Location:
4 D3; 4 75.38 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (141811609..141815412)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (142084298..142088101)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930455G09 gene Neighboring gene forkhead-associated phosphopeptide binding domain 1 Neighboring gene STARR-positive B cell enhancer ABC_E10274 Neighboring gene forkhead-associated phosphopeptide binding domain 1, opposite strand 1 Neighboring gene STARR-seq mESC enhancer starr_11942 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:141636026-141636227 Neighboring gene transmembrane protein 51 Neighboring gene STARR-seq mESC enhancer starr_11946 Neighboring gene STARR-seq mESC enhancer starr_11949 Neighboring gene STARR-seq mESC enhancer starr_11950 Neighboring gene predicted gene, 35581 Neighboring gene kazrin, periplakin interacting protein Neighboring gene predicted gene, 35531

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Other Names

  • Tmem51 antisense RNA 1

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027137.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL663037
    Related
    ENSMUST00000150202.8

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    141811609..141815412
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)