Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv5975464

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:175,573

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 556 SVs from 33 studies. See in: genome view

Submitted genomic12,378,990-12,554,562

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5975464	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000024.10	ChrY	12,378,990	12,554,562
nsv5975464	Remapped	Good	GRCh37.p13	Primary Assembly	First Pass	NC_000024.9	ChrY	14,491,216	14,666,496

Variant Call Information

Variant Call ID	Type	Method	Analysis	Copy number
nssv17517054	copy number variation	Sequencing	Sequence alignment	0

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17517054	Submitted genomic		GRCh38 (hg38)		NC_000024.10	ChrY	12,378,990	12,554,562
nssv17517054	Remapped	Good	GRCh37.p13	First Pass	NC_000024.9	ChrY	14,491,216	14,666,496

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

You are here: NCBI