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dbVar

Database of genomic structural variation

nsv5963174

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:98

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 100 SVs from 26 studies. See in: genome view

Submitted genomic34,157,738-34,157,835

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5963174	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000022.11	Chr22	34,157,738	34,157,835
nsv5963174	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000022.10	Chr22	34,553,727	34,553,824

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17394764	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17394764	Submitted genomic		NC_000022.11:g.341 57738_34157835del	GRCh38 (hg38)		NC_000022.11	Chr22	34,157,738	34,157,835
nssv17394764	Remapped	Perfect	NC_000022.10:g.345 53727_34553824del	GRCh37.p13	First Pass	NC_000022.10	Chr22	34,553,727	34,553,824

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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