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dbVar

Database of genomic structural variation

nsv5918891

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:3,582,903

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 10806 SVs from 119 studies. See in: genome view

Submitted genomic71,592,506-75,175,408

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5918891	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000007.14	Chr7	71,592,506	75,175,408
nsv5918891	Remapped	Pass	GRCh37.p13	Primary Assembly	Second Pass	NC_000007.13	Chr7	71,935,722	74,527,751
nsv5918891	Remapped	Pass	GRCh37.p13	PATCHES	First Pass	NW_003871064.1	Chr7\|NW_00 3871064.1	1	2,704,644

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17436502	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17436502	Submitted genomic		NC_000007.14:g.715 92506_75175408del	GRCh38 (hg38)		NC_000007.14	Chr7	71,592,506	75,175,408
nssv17436502	Remapped	Pass	NW_003871064.1:g.1 _2704644del	GRCh37.p13	First Pass	NW_003871064.1	Chr7\|NW_00 3871064.1	1	2,704,644
nssv17436502	Remapped	Pass	NC_000007.13:g.719 35722_74527751del	GRCh37.p13	Second Pass	NC_000007.13	Chr7	71,935,722	74,527,751

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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