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dbVar

Database of genomic structural variation

nsv5902004

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:8,374

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 115 SVs from 30 studies. See in: genome view

Submitted genomic78,159,205-78,167,578

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5902004	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000003.12	Chr3	78,159,205	78,167,578
nsv5902004	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000003.11	Chr3	78,208,356	78,216,729

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17424741	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17424741	Submitted genomic		NC_000003.12:g.781 59205_78167578del	GRCh38 (hg38)		NC_000003.12	Chr3	78,159,205	78,167,578
nssv17424741	Remapped	Perfect	NC_000003.11:g.782 08356_78216729del	GRCh37.p13	First Pass	NC_000003.11	Chr3	78,208,356	78,216,729

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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