nsv5885320
- Organism: Homo sapiens
- Study:nstd209 (Almarri et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,100
- Publication(s):Almarri et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 150 SVs from 24 studies. See in: genome view
Overlapping variant regions from other studies: 149 SVs from 24 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5885320 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000017.11 | Chr17 | 54,475,641 | 54,476,740 | ||
| nsv5885320 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000017.10 | Chr17 | 52,553,002 | 52,554,101 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv17475125 | copy number variation | Sequencing | Sequence alignment | 2 |
| nssv17478836 | copy number variation | Sequencing | Sequence alignment | 0 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv17475125 | Submitted genomic | GRCh38 (hg38) | NC_000017.11 | Chr17 | 54,475,641 | 54,476,740 | ||
| nssv17478836 | Submitted genomic | GRCh38 (hg38) | NC_000017.11 | Chr17 | 54,475,641 | 54,476,740 | ||
| nssv17475125 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 52,553,002 | 52,554,101 |
| nssv17478836 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 52,553,002 | 52,554,101 |