nsv5856738
- Organism: Homo sapiens
- Study:nstd209 (Almarri et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:3
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,900
- Publication(s):Almarri et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 133 SVs from 35 studies. See in: genome view
Overlapping variant regions from other studies: 133 SVs from 35 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5856738 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000009.12 | Chr9 | 125,197,871 | 125,199,770 | ||
| nsv5856738 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 127,960,150 | 127,962,049 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv17511356 | copy number variation | Sequencing | Sequence alignment | 0 |
| nssv17511357 | copy number variation | Sequencing | Sequence alignment | 2 |
| nssv17511358 | copy number variation | Sequencing | Sequence alignment | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv17511356 | Submitted genomic | GRCh38 (hg38) | NC_000009.12 | Chr9 | 125,197,871 | 125,199,770 | ||
| nssv17511357 | Submitted genomic | GRCh38 (hg38) | NC_000009.12 | Chr9 | 125,197,871 | 125,199,770 | ||
| nssv17511358 | Submitted genomic | GRCh38 (hg38) | NC_000009.12 | Chr9 | 125,197,871 | 125,199,770 | ||
| nssv17511356 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 127,960,150 | 127,962,049 |
| nssv17511357 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 127,960,150 | 127,962,049 |
| nssv17511358 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 127,960,150 | 127,962,049 |