nsv5847794
- Organism: Homo sapiens
- Study:nstd209 (Almarri et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,250
- Publication(s):Almarri et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 453 SVs from 51 studies. See in: genome view
Overlapping variant regions from other studies: 486 SVs from 51 studies. See in: genome view
Overlapping variant regions from other studies: 71 SVs from 21 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5847794 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000008.11 | Chr8 | 144,420,470 | 144,421,719 | ||
| nsv5847794 | Remapped | Good | GRCh37.p13 | Primary Assembly | Second Pass | NC_000008.10 | Chr8 | 145,645,854 | 145,647,102 |
| nsv5847794 | Remapped | Perfect | GRCh37.p13 | PATCHES | First Pass | NW_003315924.1 | Chr8|NW_00 3315924.1 | 189,729 | 190,978 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv17507640 | copy number variation | Sequencing | Sequence alignment | 0 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv17507640 | Submitted genomic | GRCh38 (hg38) | NC_000008.11 | Chr8 | 144,420,470 | 144,421,719 | ||
| nssv17507640 | Remapped | Perfect | GRCh37.p13 | First Pass | NW_003315924.1 | Chr8|NW_00 3315924.1 | 189,729 | 190,978 |
| nssv17507640 | Remapped | Good | GRCh37.p13 | Second Pass | NC_000008.10 | Chr8 | 145,645,854 | 145,647,102 |