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dbVar

Database of genomic structural variation

nsv5667399

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:inversion
Method Type:Optical mapping, Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1,205,215

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 3237 SVs from 102 studies. See in: genome view

Submitted genomic108,527,822-109,733,036

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5667399	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000002.12	Chr2	108,527,822	109,733,036
nsv5667399	Remapped	Pass	GRCh37.p13	Primary Assembly	First Pass	NC_000002.11	Chr2	109,144,278	110,490,613

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17107497	inversion	HG03125	Optical mapping, Sequencing	Optical mapping, Sequence alignment	5,031

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17107497	Submitted genomic		NC_000002.12:g.108 527822_109733036in v	GRCh38 (hg38)		NC_000002.12	Chr2	108,527,822	109,733,036
nssv17107497	Remapped	Pass	NC_000002.11:g.109 144278_110490613in v	GRCh37.p13	First Pass	NC_000002.11	Chr2	109,144,278	110,490,613

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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