nsv5662369
- Organism: Homo sapiens
- Study:nstd207 (Ebert et al. 2021)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:3
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Ebert et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 132 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 132 SVs from 26 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5662369 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000016.10 | Chr16 | 67,782,758 | 67,782,758 | ||
| nsv5662369 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000016.9 | Chr16 | 67,816,661 | 67,816,661 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv17080412 | insertion | SAMN00006579 | Sequencing | Sequence alignment | 23,265 |
| nssv17090994 | insertion | SAMN00001695 | Sequencing | Sequence alignment | 6,153 |
| nssv17097487 | insertion | SAMN00004622 | Sequencing | Sequence alignment | 1,208 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17080412 | Submitted genomic | NC_000016.10:g.677 82758_67782759ins2 17 | GRCh38 (hg38) | NC_000016.10 | Chr16 | 67,782,758 | 67,782,758 | ||
| nssv17090994 | Submitted genomic | NC_000016.10:g.677 82758_67782759ins8 2 | GRCh38 (hg38) | NC_000016.10 | Chr16 | 67,782,758 | 67,782,758 | ||
| nssv17097487 | Submitted genomic | NC_000016.10:g.677 82758_67782759ins4 87 | GRCh38 (hg38) | NC_000016.10 | Chr16 | 67,782,758 | 67,782,758 | ||
| nssv17080412 | Remapped | Perfect | NC_000016.9:g.6781 6661_67816662ins21 7 | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 67,816,661 | 67,816,661 |
| nssv17090994 | Remapped | Perfect | NC_000016.9:g.6781 6661_67816662ins82 | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 67,816,661 | 67,816,661 |
| nssv17097487 | Remapped | Perfect | NC_000016.9:g.6781 6661_67816662ins48 7 | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 67,816,661 | 67,816,661 |