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dbVar

Database of genomic structural variation

nsv5417961

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:306

Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 143 SVs from 41 studies. See in: genome view

Submitted genomic95,224,968-95,225,273

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5417961	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000001.11	Chr1	95,224,968	95,225,273
nsv5417961	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	95,690,524	95,690,829

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16906709	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16906709	Submitted genomic		NC_000001.11:g.952 24968_95225273del	GRCh38 (hg38)		NC_000001.11	Chr1	95,224,968	95,225,273
nssv16906709	Remapped	Perfect	NC_000001.10:g.956 90524_95690829del	GRCh37.p13	First Pass	NC_000001.10	Chr1	95,690,524	95,690,829

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16906709	0.827	5291	6402

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