nsv4986997
- Organism: Homo sapiens
- Study:nstd200 (Abel et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:4,175
- Publication(s):Abel et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 110 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 110 SVs from 26 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv4986997 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000011.10 | Chr11 | 33,703,691 (-30, +41) | 33,707,865 (-41, +29) | ||
nsv4986997 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 33,725,237 (-30, +41) | 33,729,411 (-41, +29) |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv16523515 | deletion | Sequencing | Sequence alignment |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv16523515 | Submitted genomic | NC_000011.10:g.(33 703661_33703732)_( 33707824_33707894) del | GRCh38 (hg38) | NC_000011.10 | Chr11 | 33,703,691 (-30, +41) | 33,707,865 (-41, +29) | ||
nssv16523515 | Remapped | Perfect | NC_000011.9:g.(337 25207_33725278)_(3 3729370_33729440)d el | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 33,725,237 (-30, +41) | 33,729,411 (-41, +29) |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
---|---|---|---|
nssv16523515 | <0.001 | 5 | 29246 |