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dbVar

Database of genomic structural variation

nsv4906383

Organism: Homo sapiens

Study:nstd200 (Abel et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1,068

Publication(s):Abel et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 134 SVs from 28 studies. See in: genome view

Submitted genomic100,283,455-100,284,523

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4906383	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000001.11	Chr1	100,283,456 (-1, +1)	100,284,523
nsv4906383	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	100,749,012 (-1, +1)	100,750,079

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16421609	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16421609	Submitted genomic		NC_000001.11:g.(10 0283455_100283457) _100284523del	GRCh38 (hg38)		NC_000001.11	Chr1	100,283,456 (-1, +1)	100,284,523
nssv16421609	Remapped	Perfect	NC_000001.10:g.(10 0749011_100749013) _100750079del	GRCh37.p13	First Pass	NC_000001.10	Chr1	100,749,012 (-1, +1)	100,750,079

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16421609	<0.001	7	29246

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