nsv4772168
- Organism: Homo sapiens
- Study:nstd200 (Abel et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:11,341
- Publication(s):Abel et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 189 SVs from 33 studies. See in: genome view
Overlapping variant regions from other studies: 189 SVs from 33 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv4772168 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 11,910,456 (-94, +2) | 11,921,796 (-2, +86) |
nsv4772168 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 11,970,513 (-94, +2) | 11,981,853 (-2, +86) |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv16382145 | duplication | Sequencing | Sequence alignment |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv16382145 | Remapped | Perfect | NC_000001.11:g.(11 910362_11910458)_( 11921794_11921882) dup | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 11,910,456 (-94, +2) | 11,921,796 (-2, +86) |
nssv16382145 | Submitted genomic | NC_000001.10:g.(11 970419_11970515)_( 11981851_11981939) dup | GRCh37 (hg19) | NC_000001.10 | Chr1 | 11,970,513 (-94, +2) | 11,981,853 (-2, +86) |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
---|---|---|---|
nssv16382145 | <0.001 | 1 | 16834 |