nsv4728948
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:1,319,350
- Description:GRCh37/hg19 11p11.2-11.12(chr11:48242702-49562051)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 6846 SVs from 112 studies. See in: genome view
Overlapping variant regions from other studies: 6846 SVs from 112 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv4728948 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 48,221,150 | 49,540,499 |
nsv4728948 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000011.9 | Chr11 | 48,242,702 | 49,562,051 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
---|---|---|---|---|---|---|---|---|
nssv16255184 | copy number gain | Multiple | Multiple | not provided | Likely benign | ClinVar | RCV001259095.1, VCV000979919.1 | 3 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv16255184 | Remapped | Perfect | NC_000011.10:g.(?_ 48221150)_(4954049 9_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 48,221,150 | 49,540,499 |
nssv16255184 | Submitted genomic | NC_000011.9:g.(?_4 8242702)_(49562051 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 48,242,702 | 49,562,051 |
No validation data were submitted for this variant
Clinical Assertions
Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
---|---|---|---|---|---|---|---|---|
nssv16255184 | GRCh37: NC_000011.9:g.(?_48242702)_(49562051_?)dup | copy number gain | germline | not provided | Likely benign | ClinVar | RCV001259095.1, VCV000979919.1 | 3 |