nsv4728145
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:2,015,914
- Description:GRCh37/hg19 1q31.1-31.2(chr1:190098893-192114806)x1 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 5703 SVs from 109 studies. See in: genome view
Overlapping variant regions from other studies: 5703 SVs from 109 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4728145 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 190,129,763 | 192,145,676 |
| nsv4728145 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 190,098,893 | 192,114,806 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16254179 | copy number loss | Multiple | Multiple | not provided | Uncertain significance | ClinVar | RCV001259103.1, VCV000979927.1 | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16254179 | Remapped | Perfect | NC_000001.11:g.(?_ 190129763)_(192145 676_?)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 190,129,763 | 192,145,676 |
| nssv16254179 | Submitted genomic | NC_000001.10:g.(?_ 190098893)_(192114 806_?)del | GRCh37 (hg19) | NC_000001.10 | Chr1 | 190,098,893 | 192,114,806 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16254179 | GRCh37: NC_000001.10:g.(?_190098893)_(192114806_?)del | copy number loss | germline | not provided | Uncertain significance | ClinVar | RCV001259103.1, VCV000979927.1 | 1 |