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dbVar

Database of genomic structural variation

nsv4674460

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:288,506

Description:GRCh37/hg19 Yq11.223(chrY:23553019-23841524)x0 AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 379 SVs from 40 studies. See in: genome view

Remapped(Score: Perfect):21,391,133-21,679,638

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4674460	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000024.10	ChrY	21,391,133	21,679,638
nsv4674460	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000024.9	ChrY	23,553,019	23,841,524

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv16209031	copy number loss	Multiple	Multiple	not provided	Uncertain significance	ClinVar	RCV001007398.1, VCV000816444.1	0

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv16209031	Remapped	Perfect	NC_000024.10:g.(?_ 21391133)_(2167963 8_?)del	GRCh38.p12	First Pass	NC_000024.10	ChrY	21,391,133	21,679,638
nssv16209031	Submitted genomic		NC_000024.9:g.(?_2 3553019)_(23841524 _?)del	GRCh37 (hg19)		NC_000024.9	ChrY	23,553,019	23,841,524

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv16209031	GRCh37: NC_000024.9:g.(?_23553019)_(23841524_?)del	copy number loss	germline	not provided	Uncertain significance	ClinVar	RCV001007398.1, VCV000816444.1	0

No genotype data were submitted for this variant

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