nsv4454842
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:21,505,330
- Description:GRCh37/hg19 Xp22.33-22.11(chrX:2190434-23795839)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 35047 SVs from 104 studies. See in: genome view
Overlapping variant regions from other studies: 35075 SVs from 104 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv4454842 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 2,272,393 | 23,777,722 |
nsv4454842 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 2,190,434 | 23,795,839 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
---|---|---|---|---|---|---|---|---|
nssv15773414 | copy number gain | Multiple | Multiple | not provided | Pathogenic | ClinVar | RCV000849574.2, VCV000688883.2 | 3 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv15773414 | Remapped | Good | NC_000023.11:g.(?_ 2272393)_(23777722 _?)dup | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 2,272,393 | 23,777,722 |
nssv15773414 | Submitted genomic | NC_000023.10:g.(?_ 2190434)_(23795839 _?)dup | GRCh37 (hg19) | NC_000023.10 | ChrX | 2,190,434 | 23,795,839 |
No validation data were submitted for this variant
Clinical Assertions
Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
---|---|---|---|---|---|---|---|---|
nssv15773414 | GRCh37: NC_000023.10:g.(?_2190434)_(23795839_?)dup | copy number gain | unknown | not provided | Pathogenic | ClinVar | RCV000849574.2, VCV000688883.2 | 3 |