nsv3922178
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37, GRCh38, NCBI36
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:12,115,608
- Description:GRCh38/hg38 12p13.33-12.3(chr12:2871741-14987348)x3 AND See cases
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 39917 SVs from 137 studies. See in: genome view
Overlapping variant regions from other studies: 39932 SVs from 137 studies. See in: genome view
Overlapping variant regions from other studies: 11005 SVs from 39 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Assembly | Assembly Unit | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|
| nsv3922178 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000012.12 | Chr12 | 2,871,741 | 14,987,348 |
| nsv3922178 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000012.11 | Chr12 | 2,980,907 | 15,140,282 |
| nsv3922178 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000012.10 | Chr12 | 2,851,168 | 15,031,549 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15145866 | copy number gain | Multiple | Multiple | See cases | Pathogenic | ClinVar | RCV000137694.6, VCV000148626.2 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | HGVS | Assembly | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|
| nssv15145866 | Submitted genomic | NC_000012.12:g.(?_ 2871741)_(14987348 _?)dup | GRCh38 (hg38) | NC_000012.12 | Chr12 | 2,871,741 | 14,987,348 |
| nssv15145866 | Submitted genomic | NC_000012.11:g.(?_ 2980907)_(15140282 _?)dup | GRCh37 (hg19) | NC_000012.11 | Chr12 | 2,980,907 | 15,140,282 |
| nssv15145866 | Submitted genomic | NC_000012.10:g.(?_ 2851168)_(15031549 _?)dup | NCBI36 (hg18) | NC_000012.10 | Chr12 | 2,851,168 | 15,031,549 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15145866 | GRCh37: NC_000012.11:g.(?_2980907)_(15140282_?)dup, GRCh38: NC_000012.12:g.(?_2871741)_(14987348_?)dup, NCBI36: NC_000012.10:g.(?_2851168)_(15031549_?)dup | copy number gain | not provided | See cases | Pathogenic | ClinVar | RCV000137694.6, VCV000148626.2 | 3 |