nsv3910985
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37, GRCh38, NCBI36
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:4,946,511
- Description:GRCh38/hg38 6q24.3-25.1(chr6:146481119-151427629)x1 AND See cases
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 12654 SVs from 112 studies. See in: genome view
Overlapping variant regions from other studies: 12654 SVs from 112 studies. See in: genome view
Overlapping variant regions from other studies: 3149 SVs from 28 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Assembly | Assembly Unit | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|
| nsv3910985 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000006.12 | Chr6 | 146,481,119 | 151,427,629 |
| nsv3910985 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000006.11 | Chr6 | 146,802,255 | 151,748,764 |
| nsv3910985 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000006.10 | Chr6 | 146,843,948 | 151,790,457 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15146329 | copy number loss | Multiple | Multiple | See cases | Pathogenic | ClinVar | RCV000051005.4, VCV000057320.1 | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | HGVS | Assembly | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|
| nssv15146329 | Submitted genomic | NC_000006.12:g.(?_ 146481119)_(151427 629_?)del | GRCh38 (hg38) | NC_000006.12 | Chr6 | 146,481,119 | 151,427,629 |
| nssv15146329 | Submitted genomic | NC_000006.11:g.(?_ 146802255)_(151748 764_?)del | GRCh37 (hg19) | NC_000006.11 | Chr6 | 146,802,255 | 151,748,764 |
| nssv15146329 | Submitted genomic | NC_000006.10:g.(?_ 146843948)_(151790 457_?)del | NCBI36 (hg18) | NC_000006.10 | Chr6 | 146,843,948 | 151,790,457 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15146329 | GRCh37: NC_000006.11:g.(?_146802255)_(151748764_?)del, GRCh38: NC_000006.12:g.(?_146481119)_(151427629_?)del, NCBI36: NC_000006.10:g.(?_146843948)_(151790457_?)del | copy number loss | not provided | See cases | Pathogenic | ClinVar | RCV000051005.4, VCV000057320.1 | 1 |