nsv3877040
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:170,685,592
- Description:GRCh37/hg19 6p25.3-q27(chr6:60107-171054786)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 464827 SVs from 153 studies. See in: genome view
Overlapping variant regions from other studies: 463174 SVs from 153 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3877040 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 60,107 | 170,745,698 |
| nsv3877040 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000006.11 | Chr6 | 60,107 | 171,054,786 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15166690 | copy number gain | Multiple | Multiple | not provided | Pathogenic | ClinVar | RCV000745400.2, VCV000608764.2 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15166690 | Remapped | Good | NC_000006.12:g.(?_ 60107)_(170745698_ ?)dup | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 60,107 | 170,745,698 |
| nssv15166690 | Submitted genomic | NC_000006.11:g.(?_ 60107)_(171054786_ ?)dup | GRCh37 (hg19) | NC_000006.11 | Chr6 | 60,107 | 171,054,786 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15166690 | GRCh37: NC_000006.11:g.(?_60107)_(171054786_?)dup | copy number gain | unknown | not provided | Pathogenic | ClinVar | RCV000745400.2, VCV000608764.2 | 3 |