esv2759411
- Organism: Homo sapiens
- Study:estd1 (Redon et al. 2006)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:203,631
- Publication(s):Redon et al. 2006
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 583 SVs from 63 studies. See in: genome view
Overlapping variant regions from other studies: 34 SVs from 6 studies. See in: genome view
Overlapping variant regions from other studies: 32 SVs from 6 studies. See in: genome view
Overlapping variant regions from other studies: 26 SVs from 4 studies. See in: genome view
Overlapping variant regions from other studies: 32 SVs from 6 studies. See in: genome view
Overlapping variant regions from other studies: 32 SVs from 6 studies. See in: genome view
Overlapping variant regions from other studies: 33 SVs from 6 studies. See in: genome view
Overlapping variant regions from other studies: 23 SVs from 6 studies. See in: genome view
Overlapping variant regions from other studies: 583 SVs from 63 studies. See in: genome view
Overlapping variant regions from other studies: 33 SVs from 6 studies. See in: genome view
Overlapping variant regions from other studies: 32 SVs from 6 studies. See in: genome view
Overlapping variant regions from other studies: 34 SVs from 6 studies. See in: genome view
Overlapping variant regions from other studies: 32 SVs from 6 studies. See in: genome view
Overlapping variant regions from other studies: 26 SVs from 4 studies. See in: genome view
Overlapping variant regions from other studies: 23 SVs from 6 studies. See in: genome view
Overlapping variant regions from other studies: 32 SVs from 6 studies. See in: genome view
Overlapping variant regions from other studies: 36 SVs from 6 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
esv2759411 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 29,501,324 | 29,704,888 |
esv2759411 | Remapped | Good | GRCh38.p12 | ALT_REF_LOCI_5 | Second Pass | NT_167247.2 | Chr6|NT_16 7247.2 | 766,699 | 970,251 |
esv2759411 | Remapped | Good | GRCh38.p12 | ALT_REF_LOCI_6 | Second Pass | NT_167248.2 | Chr6|NT_16 7248.2 | 766,790 | 970,387 |
esv2759411 | Remapped | Good | GRCh38.p12 | ALT_REF_LOCI_7 | Second Pass | NT_167249.2 | Chr6|NT_16 7249.2 | 810,335 | 1,013,923 |
esv2759411 | Remapped | Good | GRCh38.p12 | ALT_REF_LOCI_4 | Second Pass | NT_167246.2 | Chr6|NT_16 7246.2 | 766,449 | 970,001 |
esv2759411 | Remapped | Good | GRCh38.p12 | ALT_REF_LOCI_3 | Second Pass | NT_167245.2 | Chr6|NT_16 7245.2 | 766,847 | 970,432 |
esv2759411 | Remapped | Good | GRCh38.p12 | ALT_REF_LOCI_2 | Second Pass | NT_113891.3 | Chr6|NT_11 3891.3 | 987,776 | 1,191,406 |
esv2759411 | Remapped | Good | GRCh38.p12 | ALT_REF_LOCI_1 | Second Pass | NT_167244.2 | Chr6|NT_16 7244.2 | 766,985 | 964,446 |
esv2759411 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000006.11 | Chr6 | 29,469,101 | 29,672,665 |
esv2759411 | Remapped | Good | GRCh37.p13 | ALT_REF_LOCI_2 | Second Pass | NT_113891.2 | Chr6|NT_11 3891.2 | 987,882 | 1,191,512 |
esv2759411 | Remapped | Good | GRCh37.p13 | ALT_REF_LOCI_3 | Second Pass | NT_167245.1 | Chr6|NT_16 7245.1 | 772,432 | 976,017 |
esv2759411 | Remapped | Good | GRCh37.p13 | ALT_REF_LOCI_5 | Second Pass | NT_167247.1 | Chr6|NT_16 7247.1 | 772,284 | 975,836 |
esv2759411 | Remapped | Good | GRCh37.p13 | ALT_REF_LOCI_6 | Second Pass | NT_167248.1 | Chr6|NT_16 7248.1 | 772,386 | 975,983 |
esv2759411 | Remapped | Good | GRCh37.p13 | ALT_REF_LOCI_7 | Second Pass | NT_167249.1 | Chr6|NT_16 7249.1 | 809,633 | 1,013,221 |
esv2759411 | Remapped | Good | GRCh37.p13 | ALT_REF_LOCI_1 | Second Pass | NT_167244.1 | Chr6|NT_16 7244.1 | 772,579 | 970,040 |
esv2759411 | Remapped | Good | GRCh37.p13 | ALT_REF_LOCI_4 | Second Pass | NT_167246.1 | Chr6|NT_16 7246.1 | 772,069 | 975,621 |
esv2759411 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000006.9 | Chr6 | 29,577,080 | 29,780,644 |
Variant Call Information
Variant Call ID | Type | Method |
---|---|---|
esv2758039 | copy number variation | Merged region |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|
esv2758039 | Remapped | Good | GRCh38.p12 | Second Pass | NT_167246.2 | Chr6|NT_16 7246.2 | 766,449 | 970,001 |
esv2758039 | Remapped | Good | GRCh38.p12 | Second Pass | NT_167247.2 | Chr6|NT_16 7247.2 | 766,699 | 970,251 |
esv2758039 | Remapped | Good | GRCh38.p12 | Second Pass | NT_167248.2 | Chr6|NT_16 7248.2 | 766,790 | 970,387 |
esv2758039 | Remapped | Good | GRCh38.p12 | Second Pass | NT_167249.2 | Chr6|NT_16 7249.2 | 810,335 | 1,013,923 |
esv2758039 | Remapped | Good | GRCh38.p12 | Second Pass | NT_167245.2 | Chr6|NT_16 7245.2 | 766,847 | 970,432 |
esv2758039 | Remapped | Good | GRCh38.p12 | Second Pass | NT_167244.2 | Chr6|NT_16 7244.2 | 766,985 | 964,446 |
esv2758039 | Remapped | Good | GRCh38.p12 | Second Pass | NT_113891.3 | Chr6|NT_11 3891.3 | 987,776 | 1,191,406 |
esv2758039 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 29,501,324 | 29,704,888 |
esv2758039 | Remapped | Good | GRCh37.p13 | Second Pass | NT_167246.1 | Chr6|NT_16 7246.1 | 772,069 | 975,621 |
esv2758039 | Remapped | Good | GRCh37.p13 | Second Pass | NT_167247.1 | Chr6|NT_16 7247.1 | 772,284 | 975,836 |
esv2758039 | Remapped | Good | GRCh37.p13 | Second Pass | NT_167248.1 | Chr6|NT_16 7248.1 | 772,386 | 975,983 |
esv2758039 | Remapped | Good | GRCh37.p13 | Second Pass | NT_167245.1 | Chr6|NT_16 7245.1 | 772,432 | 976,017 |
esv2758039 | Remapped | Good | GRCh37.p13 | Second Pass | NT_167244.1 | Chr6|NT_16 7244.1 | 772,579 | 970,040 |
esv2758039 | Remapped | Good | GRCh37.p13 | Second Pass | NT_167249.1 | Chr6|NT_16 7249.1 | 809,633 | 1,013,221 |
esv2758039 | Remapped | Good | GRCh37.p13 | Second Pass | NT_113891.2 | Chr6|NT_11 3891.2 | 987,882 | 1,191,512 |
esv2758039 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 29,469,101 | 29,672,665 |
esv2758039 | Submitted genomic | NCBI35 (hg17) | NC_000006.9 | Chr6 | 29,577,080 | 29,780,644 |