esv2762813
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:121,822
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 588 SVs from 63 studies. See in: genome view
Overlapping variant regions from other studies: 594 SVs from 64 studies. See in: genome view
Overlapping variant regions from other studies: 218 SVs from 17 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2762813 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 33,139,254 | 33,261,075 |
| esv2762813 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 33,139,252 | 33,261,073 |
| esv2762813 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000009.10 | Chr9 | 33,129,252 | 33,251,073 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv7017661 | copy number gain | RW_0141 | SNP array | SNP genotyping analysis | 44 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv7017661 | Remapped | Perfect | NC_000009.12:g.(?_ 33139254)_(3326107 5_?)dup | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 33,139,254 | 33,261,075 |
| essv7017661 | Remapped | Perfect | NC_000009.11:g.(?_ 33139252)_(3326107 3_?)dup | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 33,139,252 | 33,261,073 |
| essv7017661 | Submitted genomic | NC_000009.10:g.(?_ 33129252)_(3325107 3_?)dup | NCBI36 (hg18) | NC_000009.10 | Chr9 | 33,129,252 | 33,251,073 |