CALHM4[gene] - ClinVar

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Items: 41

	Variation	Gene (Protein Change)	Type (Consequence)	Condition	Classification, Review status
Select item 150937	GRCh38/hg38 6q13-24.1(chr6:74382807-142040500)x3	LOC123775388, LOC123775389 +1449 more	Copy number gain	See cases	GPathogenic
Select item 150641	GRCh38/hg38 6q16.1-22.31(chr6:96609994-122161548)x1	LOC129389591, LOC129389592 +558 more	Copy number loss	See cases	GPathogenic
Select item 155160	GRCh38/hg38 6q16.3-22.31(chr6:100054889-120488154)x1	LOC129997076, LOC129997077 +460 more	Copy number loss	See cases	GPathogenic
Select item 153088	GRCh38/hg38 6q21-22.31(chr6:106503719-125781219)x1	AFG1L, AK9 +472 more	Copy number loss	See cases	GPathogenic
Select item 57486	GRCh38/hg38 6q21-23.2(chr6:108944899-132067720)x1	AK9, AKAP7 +519 more	Copy number loss	See cases	GPathogenic
Select item 2579265	GRCh38/hg38 6q21-23.1(chr6:113857248-130442177)x1	ARHGAP18, ASF1A +316 more	Copy number loss	Intellectual disability, autosomal dominant 55, with seizures	GPathogenic
Select item 58441	GRCh38/hg38 6q22.1(chr6:115220054-117196371)x1	CALHM4, CALHM5 +64 more	Copy number loss	See cases	GPathogenic
Select item 146318	GRCh38/hg38 6q22.1-22.2(chr6:115326962-117935240)x1	LOC129997064, LOC129997065 +91 more	Copy number loss	See cases	GLikely pathogenic
Select item 58442	GRCh38/hg38 6q22.1-22.33(chr6:115601230-128514324)x1	LOC129389639, LOC129389640 +254 more	Copy number loss	See cases	GPathogenic
Select item 1703230	Single allele	AKAP7, ARG1 +400 more	Deletion	Interstitial 6q microdeletion syndrome	GPathogenic
Select item 3181995	NM_001139444.3(TRAPPC3L):c.224T>C (p.Ile75Thr)	CALHM4, TRAPPC3L (I75T)	Single nucleotide variant (missense variant +1 more)	not specified	GLikely benign
Select item 2327156	NM_001139444.3(TRAPPC3L):c.62T>C (p.Leu21Pro)	CALHM4, TRAPPC3L (L21P)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 3181997	NM_001139444.3(TRAPPC3L):c.52C>T (p.Leu18Phe)	CALHM4, TRAPPC3L (L18F)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 2552416	NM_001366078.2(CALHM4):c.572T>C (p.Ile191Thr)	CALHM4 (I5T +3 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3136709	NM_001366078.2(CALHM4):c.718T>C (p.Ser240Pro)	CALHM4 (S240P +3 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3136710	NM_001366078.2(CALHM4):c.721C>T (p.Arg241Trp)	CALHM4 (R97W +3 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3136711	NM_001366078.2(CALHM4):c.734T>C (p.Met245Thr)	CALHM4 (M59T +3 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3136712	NM_001366078.2(CALHM4):c.740G>A (p.Arg247His)	CALHM4 (R104H +3 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2596194	NM_001366078.2(CALHM4):c.781G>A (p.Val261Ile)	CALHM4 (V117I +3 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3136713	NM_001366078.2(CALHM4):c.785A>G (p.Lys262Arg)	CALHM4 (K119R +3 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3136714	NM_001366078.2(CALHM4):c.805T>G (p.Cys269Gly)	CALHM4 (C125G +3 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3136715	NM_001366078.2(CALHM4):c.877T>C (p.Phe293Leu)	CALHM4 (F293L +3 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3062896	GRCh37/hg19 6q21-23.2(chr6:110546061-131896074)x3	AKAP7, AMD1 +87 more	Copy number gain	not specified	GLikely pathogenic
Select item 2574685	GRCh37/hg19 6q21-22.31(chr6:112713854-124105184)	ASF1A, CALHM4 +39 more	Copy number loss	6q terminal deletion syndrome	GLikely pathogenic
Select item 2427242	NC_000006.11:g.(?_116441236)_(119252888_?)del	TRAPPC3L, TSPYL4 +24 more	Deletion	Congenital disorder of glycosylation, type IAA	GPathogenic
Select item 1808570	GRCh37/hg19 6q22.1(chr6:116787149-116953270)x1	CALHM4, CALHM5 +3 more	Copy number loss	not provided	GUncertain significance
Select item 1527278	GRCh37/hg19 6q22.1-22.31(chr6:116212698-119482708)	DCBLD1, DSE +26 more	Copy number loss	not specified	GPathogenic
Select item 1527266	GRCh37/hg19 6q15-22.2(chr6:92054891-118329651)	FBXL4, WASF1 +98 more	Copy number loss	not specified	GPathogenic
Select item 1527263	GRCh37/hg19 6q14.3-22.31(chr6:85988428-120548687)	CALHM4, PRDM13 +138 more	Copy number loss	not specified	GPathogenic
Select item 978186	NC_000006.11:g.116734559_123648104del	ASF1A, CALHM4 +31 more	Deletion	Seizure +1 more	GPathogenic
Select item 974790	GRCh37/hg19 6q16.3-22.1(chr6:101296547-117004249)x3	DSE, FAM229B +69 more	Copy number gain	Microcephaly +1 more	GPathogenic
Select item 688010	GRCh37/hg19 6q21-22.31(chr6:110981075-119608396)x1	AMD1, ASF1A +45 more	Copy number loss	not provided	GPathogenic
Select item 563224	GRCh37/hg19 6q22.1(chr6:116656963-116903944)x3	CALHM4, CALHM5 +4 more	Copy number gain	not provided	GUncertain significance
Select item 563222	GRCh37/hg19 6q21-22.1(chr6:113261042-117842826)x1	CALHM4, CALHM5 +21 more	Copy number loss	not provided	GPathogenic
Select item 523159	GRCh37/hg19 6q21-23.2(chr6:112939290-132327952)x1	EPB41L2, FABP7 +73 more	Copy number loss	Poly (ADP-Ribose) polymerase inhibitor response	Gdrug response
Select item 443497	GRCh37/hg19 6p25.3-q27(chr6:156975-170919482)	AIRN, BNIP5 +1028 more	Copy number gain	See cases	GPathogenic
Select item 443496	GRCh37/hg19 6p25.3-q27(chr6:156975-170919482)x3	PDE10A, PDE7B +1028 more	Copy number gain	See cases	GPathogenic
Select item 425540	GRCh37/hg19 6q21-22.1(chr6:114318401-116957002)x3	FRK, HS3ST5 +12 more	Copy number gain	not provided	GUncertain significance
Select item 217142	GRCh37/hg19 6q21-q22(chr6:112069445-120994664)x1	NT5DC1, TRAPPC3L +36 more	Copy number loss	6q21-6q22.1 deletion	GLikely pathogenic
Select item 180227	NC_000006.11:g.(116681080_116735056)_(119687719_119775014)del	ASF1A, CALHM4 +22 more	Deletion	Tremor +3 more	GPathogenic
Select item 180224	NC_000006.11:g.(112511751_112511752)_(118037595_118037596)del	KPNA5, LAMA4 +25 more	Deletion	Delayed speech and language development +2 more	GPathogenic

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Items: 41