Conserved Protein Domain Family
Ripply

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pfam14998: Ripply (this model, PSSM-Id:405657 is obsolete and has been replaced by 464433)
Transcription Regulator
The precise function of this family is not clear, but it is thought to play a role in somitogenesis, development and transcriptional repression. Ripply is also known by an alternative name, Bowline. Bowline, is an associate protein of the transcriptional co-repressor XGrg-4. This family contains two conserved sequence motifs: WRPW and FPVQATI. The WRPW motif is thought to be required for binding to tle/groucho proteins. Ripply3 is also known as Down Syndrome Critical Region Protein 6 homolog. This family of proteins is found in eukaryotes. Proteins in this family are typically between 109 and 154 amino acids in length.
Statistics
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PSSM-Id: 405657
Aligned: 28 rows
Threshold Bit Score: 104.27
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_014347110  46 WRPWI-ISAKDTERQKRRQQTSPYSPPVINSSssemDKSPPLFRHPVRLLWPKSKSYDYLYNEGEKLLENFPVQATINFY 124 coelacanth
XP_001064780  34 WRPWV-RTPGEKEELAEPRAAEVLPSGPGMIEa---SRKLLQYQHPVRLFWPKSKCYDYLYQEAETLLKNFPIQATISFY 109 Norway rat
XP_008261509 192 WRPWQ-EPRGEEEEQVPPLPAEEVPCGPGMTEd---SGKLSQYRHPVRLFWPRSKCYDYLYQEAEALLKNFPIQATISFY 267 rabbit
EHB05529      14 WRPW--EARGEREEQAPRHPTEAMPGGQGMTAa---PGKLSQYRHPVRLLWPKSKRYDYLYQEAETLLKNFPIQATISFY 88  naked mole-rat
XP_005552503  37 WRPWV-DAGGKKEEETPNHAAEAMPDGPGMTAa---SGKLSQFRHPVRLFWPKSKCYDYLYQEAEALLKNFPIQATISFY 112 crab-eating mac...
XP_008119930  33 WRPWI-PTQKEAERQHQANHPTLGDSSETMED----SAKLTHYTHPVRLFWPKSRCFDYLYHEAEALLRNFPVQATLSFY 107 green anole
XP_002933961  70 WRPWL-VKSHKPKTQIHPYARGLCENPQ--------VQKPVEYNHPVRLFWPKSKLLAHTYQEAADLLRNFPVQATISLY 140 tropical clawed...
XP_001633151  11 WRPWD-MEPSENVIRKSTRYQPYRGNERIAPSqp-lRQYLNTFKHPVRLYWTKA-AYDYMYEAGESLLRNFPVQATIQIA 87  starlet sea ane...
XP_006626088  33 WRPWC-LQSESRRKERRTNNFPYPSPMVNVP-----GMKHTETVHPAKLFWPRSKCYDYLYHEAEILLRNYPVQATISFY 106 spotted gar
Q2WG79        20 WRPWLsQTSRKAPDYKPYKRPADDE-----------QHKLSIFKHPVKLFWPKSQCFDYLYEDAEVLLRNYPVQATICLY 88  zebrafish
XP_014347110 125 DDSDSEE 131 coelacanth
XP_001064780 110 EDSDSED 116 Norway rat
XP_008261509 268 EDSDSED 274 rabbit
EHB05529      89 EDSDSED 95  naked mole-rat
XP_005552503 113 EDSDSED 119 crab-eating macaque
XP_008119930 108 EDSESEE 114 green anole
XP_002933961 141 NDSESDT 147 tropical clawed frog
XP_001633151  88 EESDRED 94  starlet sea anemone
XP_006626088 107 EDSSTDT 113 spotted gar
Q2WG79        89 EDPDTED 95  zebrafish
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