Conserved Protein Domain Family
THOC2_N

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pfam16134: THOC2_N (this model, PSSM-Id:406523 is obsolete and has been replaced by 465032)
THO complex subunit 2 N-terminus
This family represents the N-terminus of THO complex subunit 2.
Statistics
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PSSM-Id: 406523
Aligned: 78 rows
Threshold Bit Score: 367.339
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EPE02248      148 TDNRIATWtatadaAAGRQAVVALGV-QARTDADEIALSTLFQEILRSTVDRRLT------PADAGAAIKEILGEYDQST 220  Ophiostoma pi...
EDO18575       24 TTEVIDNW------ETKHEELCNQYLgFDGVEEKSRWLKSIFVECFRLYYQENEDhf--ltAEQISKFVTRLVEVSKD-- 93   Vanderwaltozy...
XP_003687075   24 SEAFINDW------SSKSLELISQYLeVTDVDEKHDWLRNFFIELFQILYLPNLPnn--vtIQLLAQLINELVQKSNDS- 94   Tetrapisispor...
CCC71112       27 TKDVVNHW------DSSNRVLYSQFQaLESDEEREKWLKRFFIELFQILLQENTPernnfpIVAIATFINDISKLTPTAS 100  Naumovozyma c...
XP_003670864   35 aTNNIQNW------ETTHADLCSKFSnLQTDDEKEDWLKKFFQELFEIIL-QNITnkvtlpLQKIAKTINELCLTKSPGS 107  Naumovozyma d...
XP_003959429   28 DQDSIANW------DAHVKKLCDEFKeFTNNSERAQWLKSLFIELFQLss---------ikVERIADLIEKLSQVQSTDS 92   Kazachstania ...
CCK72019       33 kkveteGW------SAKCESLITQLGaIEDDAERIQWFKKVLGELLMMVL-DKEFgsgglsLQNVADFIDSLGKVPPTDS 105  Kazachstania ...
XP_002552039   49 aqiedqnW------ELFTQEVINNLKsSSDQADKKNRVQSVLYEIVLLS--SESNtqrpldSEKVLQLIKDMHAVE---- 116  Lachancea the...
Q754L4         23 TDEFLKDW------ATNADRLIAEYRtLAKASEQVDFVYRVFAEGLLFT--QGALrglvgdYGPLASLLAALCEN----- 89   Eremothecium ...
XP_003647570   23 TDEFLKDW------QGNSSKLLERYDsIEESSEKDNLIYDIFNEAMVFTN-KEFKdllnddYGMLGEFLSKLCEKN---- 91   Eremothecium ...
EPE02248      221 spstsAFQQHIVFLDTVSVF-----VEVEEaatnanipllRILMT-----SSAVPPALMRQILDHDFLMRIGL---LRDT 287  Ophiostoma pi...
EDO18575       94 -----SGRIGKMFIASSSTS-----NDEEV----------SKLISlmkliSSIEEEMYKYSWVSGKIM--------VKDQ 145  Vanderwaltozy...
XP_003687075   95 -----SELIGMAFVSASSTY-----SKEDD----------NRLLLlakeiPVLYDELFKFSPISSKLM--------TKDQ 146  Tetrapisispor...
CCC71112      101 ki-ptKSLMGKMFIAASLVVpsltiDRSDD------------LLTltkaiPNIHEEVFKFSWISTKLT--------IKPQ 159  Naumovozyma c...
XP_003670864  108 rt-nySSMVGKLFIAVSSSIpt--iSNTGT----------TDLLIllksiPMIQDEIFKFSWLSSKLI--------SKNQ 166  Naumovozyma d...
XP_003959429   93 -----SAIVGKMFIATTHVLpk-ilSDEKD------------LIDlikltPSIHDEIFKFSWLSSKLT--------TRGQ 146  Kazachstania ...
CCK72019      106 kv-etVSIIGKLYVAITSYIpgvvpNSEAE----------TQVIEltklvTSIHGEVYKFSALTSKIN--------TKEQ 166  Kazachstania ...
XP_002552039  117 -----GAKTARLLSSLINSF-----PEKSE-----------KLVEimvslDFMESELCTYI-TDDKLLERTAKf-tVKER 173  Lachancea the...
Q754L4         90 -----SSANARILANLINCFp---rHGGDE----------ANMVEllqqlTGMDFE------FSASLVEKLLLhrwAKEQ 145  Eremothecium ...
XP_003647570   92 -----SQANPRMLANIINYFp---rSLEDD----------SNVIAligaiRGVDFE------FSASLVEKLLThrwTKEQ 147  Eremothecium ...
EPE02248      288 --FHRMTIRFSTnqlYRQQSYNLLREETEGFSKLVTELYT-SSSSpaaAqdpsfdAARATFEKVKGLIGTFDLDVGRVLD 364  Ophiostoma pi...
EDO18575      146 ksILKHRLKKYK---YEVKKHNLFFECSVGYSQLVSLLLMaYNDN---Nnl---qKITFYIDEVYHISGKYSLDSMRVLD 216  Vanderwaltozy...
XP_003687075  147 mvLMRHLLKKTK---FELKKYNLLFECSSGYGNLIALLYMaFHDI---Dki---dKIDFYSHELSHVMGKFSLDSMRSLD 217  Tetrapisispor...
CCC71112      160 ttLLRHLMKKSK---YELKKFNLFFENSVGYSQLSILFFTaYSDQ---Drl---qKLEFYLEQMYSIIGQYSLDSMRCLD 230  Naumovozyma c...
XP_003670864  167 taLLRHLLKKSK---YELKKFNLFFENSVGYSELAVLFFMaYSDS---Dnf---iKIDYYLDQMYMIIGKFSLDSLRSLD 237  Naumovozyma d...
XP_003959429  147 tqLLKHLLKKSK---YELKKYNLLTENSVGFSQLTTFFTLiFNDN---Dkf---aKIPYYINEMYYIIGKYSLDTMRCLD 217  Kazachstania ...
CCK72019      167 nvLLRHLLKKNK---FELQKFNLLSESPVGFAQLTTLFVSfYSDN---Srl---aKLDYYTNEMYFIMGKFSLELIKSMD 237  Kazachstania ...
XP_002552039  174 alFRKSLLDTR----YIIQKYNLLSEHPIGFSELITLLVIaYSDP---Tsa---eRARSYWQEACSIVGKYSLDPLRALD 243  Lachancea the...
Q754L4        146 tsLYKRSLISEK---YHLKKYNLLFESPLGFSQICMLLHVaYADK---Drf---qSADYYWRQIQFVAGKYTLDPIRVLD 216  Eremothecium ...
XP_003647570  148 tsLYKRNLISEK---YHLKKYNLLFECAPGFSQICSLLHVaYSDK---Drf---qSLKYYWNQMQFIAGKYTLDPIRVLD 218  Eremothecium ...
EPE02248      365 TTLDVFAATIIKQFKFFVKFLRISSWW----PRdhpqhprnsffgglprwaqpdiidelvlsgkmgagggvganagafga 440  Ophiostoma pi...
EDO18575      217 TILRVSSNFITDGYTFLVEFLKASDFW----PK----------------------------------------------- 245  Vanderwaltozy...
XP_003687075  218 LILRISSEFVTEDYNFILKLLQATDFW----PN----------------------------------------------- 246  Tetrapisispor...
CCC71112      231 LFLLISNEYVTEHYHFMLKFLQLSDYW----PLeg--------------------------------------------- 261  Naumovozyma c...
XP_003670864  238 LFLIVSNEYLTNHYRFIIEFLKRSDFW----PK----------------------------------------------- 266  Naumovozyma d...
XP_003959429  218 LFLLISSEFITDNYKFVVEFLQHSDFI----KI----------------------------------------------- 246  Kazachstania ...
CCK72019      238 IFLGISAKYLYTNYSDMVAFLKATNFVrlggPD----------------------------------------------- 270  Kazachstania ...
XP_002552039  244 VILMVSSRYITKGYPFLLEFLKESDYW----PA----------------------------------------------- 272  Lachancea the...
Q754L4        217 VILRVSSVHVHHHHEFLVLLLQRSDYW----PL----------------------------------------------- 245  Eremothecium ...
XP_003647570  219 VVLRISSIYIHNHYDFLLDLLKVSDYW----PH----------------------------------------------- 247  Eremothecium ...
EPE02248      441 ggdeddseesaliseerrkrdlnfwelarklhlhafyqlggrqvvdpkllrliepassdkdkskdasdddmlllddedai 520  Ophiostoma pi...
EDO18575          --------------------------------------------------------------------------------      Vanderwaltozy...
XP_003687075      --------------------------------------------------------------------------------      Tetrapisispor...
CCC71112          --------------------------------------------------------------------------------      Naumovozyma c...
XP_003670864      --------------------------------------------------------------------------------      Naumovozyma d...
XP_003959429      --------------------------------------------------------------------------------      Kazachstania ...
CCK72019          --------------------------------------------------------------------------------      Kazachstania ...
XP_002552039      --------------------------------------------------------------------------------      Lachancea the...
Q754L4            --------------------------------------------------------------------------------      Eremothecium ...
XP_003647570      --------------------------------------------------------------------------------      Eremothecium ...
EPE02248      521 llddsmadgpatapngtaptakvedidvgnftDNELEWIKITKTMPPPGNRVAAQILGFKLR---------------FYS 585  Ophiostoma pi...
EDO18575      246 --------------------------------NNSLADNSNYVGLKKGGNLIASNIIQFYLN------------------ 275  Vanderwaltozy...
XP_003687075  247 --------------------------------EK-LSNSNISNSDHLSENVIVSNVIAFTINs--------------FAM 279  Tetrapisispor...
CCC71112      262 ----------------------------------------------rLENIIASNLIAFFLV-----------------E 278  Naumovozyma c...
XP_003670864  267 --------------------------------SD-------------VENIVAANIVAFYLNknnsvtnsneeftnqEEE 301  Naumovozyma d...
XP_003959429  247 --------------------------------ND--------------KNITLANVVSFTLN---------------GNS 265  Kazachstania ...
CCK72019      271 --------------------------------TK---------------NLALTNLLVVNLN------------------ 285  Kazachstania ...
XP_002552039  273 ----------------------------------TEANHTSFDNLHIGGNMTASQLLSMHLN------------------ 300  Lachancea the...
Q754L4        246 ----------------------------------QRSDPFAWETLNVGGSAVAAQLIAHKLK------------------ 273  Eremothecium ...
XP_003647570  248 ----------------------------------EISDPFDWNKLNYGGNVVASRLIAYKLS------------------ 275  Eremothecium ...
EPE02248      586 SSar----sADDILPANLLYLAALLIKIGFISFCDLYPHLWPADDDMDSVRKRREEELAQK--EeserfAPNDAALLATV 659  Ophiostoma pi...
EDO18575      276 SD-------LQDEEYLKYVDMCCILIINGFVNFSSIWENLKPSDSSLEEYFTEFDKELEEEslK-----GSSNPLALAAA 343  Vanderwaltozy...
XP_003687075  280 DD-------PTKLDSIRYIDMCCILIKSKFVHFSHIWIKLSPTSKEFVKQLQEYQDKLEKEsmQ-----GVSNPLAMAAA 347  Tetrapisispor...
CCC71112      279 GEkkykkgaENDQKSSTYLDMCCILIKNGFINFNTLWNNLGPTIEELETSLDDFEKHLEEEsmK-----GIENPLAMAAA 353  Naumovozyma c...
XP_003670864  302 EEdiqrsnnHQTEFVDNYIDLCCLLIKNGFIEFLTLWHNLVPEIEDLESFLDDFENNLELAsmK-----GIENPLAMAAA 376  Naumovozyma d...
XP_003959429  266 PP-------D------HYYDLCAILVKYEILDPDIIWDNIAPTTESLNEFINNIKTNLEKEsmK-----GVENPLAMAAA 327  Kazachstania ...
CCK72019      286 -E-------YDGELRESFWQICTILVQAGIVDADLVWHNLSPATESLEESLAKVETYLEKEstK-----GTDNPLAMAAA 352  Kazachstania ...
XP_002552039  301 ----------DTKVDVTFYDMTCLLVRANFVSFSSIFENLGPNEDQIQKFADQYFSDMEEDsmK-----GVLNPLAMAAA 365  Lachancea the...
Q754L4        274 ----------NEKFDHRYMDMVCVLIREGFVSYLSIFDSLGPDDETLAKYVDEYYADLCKQsqE-----GSLNPLAMAAA 338  Eremothecium ...
XP_003647570  276 ----------NEKFDHKYMDMVCILIKEGFISYISIFEALRPDEETVQTYVEEYYADLEKQssE-----GVLNPLAMAAA 340  Eremothecium ...
EPE02248      660 LE--DDDPP----AApalelskpaatdtAAADAAK--EAADAAAAEaQQKLPEPT---D-MKIQILDQLLLIGAIPEALF 727  Ophiostoma pi...
EDO18575      344 LTadDDDDDdsnsFNkdsnnkmkasqvkPNAEDNEvdDSTNQIDNKgVDEEENTKsikK--KLFLLQRLLAHGCTVPVFY 421  Vanderwaltozy...
XP_003687075  348 LSleDDEDEeangRKvddnkl--tqkspNSSEGKKtsDDHESKAQNtTNNNNIdi--tGsVHILFLERLLSIGCYDAVVQ 423  Tetrapisispor...
CCC71112      354 LSmkDDDYDprhd-----------peqtKTESEEQkkSEVQKESKQnTKAEENILkviNsGKIKLLKRVLVHGYLQPIIP 422  Naumovozyma c...
XP_003670864  377 LTmdDDDnyssdk---------rsrnvqKEEGIEVavEETDKEEKLeKEKENIRLrmlNsGKIKLLKRLLTHGCLEESIF 447  Naumovozyma d...
XP_003959429  328 LTdsGDDENiddkDTaakred--dldaeNSKNET---SKGKQEMETkENEKTVADnmkNnGKIEFLKSLLIHGCLAASSN 402  Kazachstania ...
CCK72019      353 LSaeDEDkdanmd----------aankeTAKDTGNdaETGTLENQEsASMEtl----tSsGKIQFIRYLLIFGCWDDVYK 418  Kazachstania ...
XP_002552039  366 LVddSEESEnp---------------apADSQKESdqEEELSDEEKqARKMREQEeilGsGKMFFMQRLLAHGIFTPFFS 430  Lachancea the...
Q754L4        339 LPdeDDGPPgatds----------kgedKAAQAALseQKERDEQKQeRERKNRQYkvkRtGKWRLVTSCLNHGLLIPALY 408  Eremothecium ...
XP_003647570  341 LPdeDETSApaan-----------geqkSDGQVNVkkEKERQEQREeKERKNRHYrvkRtGKWRLVTSCLNHGLLFPALY 409  Eremothecium ...
EPE02248      728 ILGRYPWIMELYSeNLLPLIHRILVRSLQKVSADARpvPVDSHDplsaecpakpfaeydpSSSIKGHkVKHTELP----I 803  Ophiostoma pi...
EDO18575      422 ILERYPKFMFIED-TTAKLVTRVFSYKLDDFYHEFCipH----L----------------HDISDPLdIPCVENGnlsvK 480  Vanderwaltozy...
XP_003687075  424 IFREHPSLMSVNK-LIPKLFARLFEYRINSLYENTClsQ----I----------------ENLTGALkDTVNESDlishR 482  Tetrapisispor...
CCC71112      423 ILQRYPRIIHIDD-ELPRLVSRILSQMILPLYNKTKfgNLSSSP------------------LSNSSrVTRIDNEllstK 483  Naumovozyma c...
XP_003670864  448 ILQKYPRVKLIDD-EIPKLLVRIFEYIIEPMYEKTQfsRSINRD----------------NALSTASsLIAVENEilsvK 510  Naumovozyma d...
XP_003959429  403 IIKRNPEVLYIDP-SIGKHVTRIFKYVIETLYEKTGytK----L----------------SNLGCSLlVSSSETSlmsqK 461  Kazachstania ...
CCK72019      419 LLRTYPKILYLDN-DIPRLIARLLEVMITPLYEKTPffL---GT----------------NGIRENLmITKSENGllshK 478  Kazachstania ...
XP_002552039  431 AFGRYQRFLLTSP-ELLKLYLKLFDHIITPIYETTAffNSAKQS-----------------------------------T 474  Lachancea the...
Q754L4        409 SIRTNEKTALSID-ILVESVLRLFEHMIRPLHEKAInaPSYQPT--------------------PRVkMKMTHSGlpskQ 467  Eremothecium ...
XP_003647570  410 SIKKNEKVALSID-ALVEACIRIFDYMIQPLYEQAInaPKCNAV--------------------SRVtMKMSNSGlpskE 468  Eremothecium ...
EPE02248      804 RRPFRWPFADKldv--adGQPYRYYFDEWLDNVPVCQTVDDVFTLCDSFLGVSGPSIGQDPELITGLATIGAKNM-HDDP 880  Ophiostoma pi...
EDO18575      481 KQLMIERETHNpfvgislQTKFKFYYSDWSKEFTKIDSIDTLISKSHKYFHYLGPYLAKEPQLISKICRIGIKSIqNNSK 560  Vanderwaltozy...
XP_003687075  483 SKLINYELTHDpyettflNTKFKFFYEDWKSELAIIESIEKLFEESHSFFYTIGPYLSHATILLSKLVRLGISDIkDEKD 562  Tetrapisispor...
CCC71112      484 PRLIDELRTHDpfqefefNTVFTFYYPEWKDGISDVETIEDLIKRSHELFTLVGPSLAKDPQFIAKICRIGIFDInEDGS 563  Naumovozyma c...
XP_003670864  511 PKLYTELKVHDpfcpfelNTSFQFYYPEWSQNLKQVNSMEEFFKISHELYSLLGPSLAKGPTLITKLCRIGIFDIyENKE 590  Naumovozyma d...
XP_003959429  462 PRLLQETKSHDpycslelNNKFVFYFPEWSDNIEQVTTVEDLFTISHEFYALCGPYLAQNSTLLSKLCRIGISDIqNSTE 541  Kazachstania ...
CCK72019      479 PRLYTTSQTGDpfagtelNVEMQFFFKEWSEGIPKCGTVDALFERSHEYLTVAGPKVAQSPSFVSKLCRIGIHDIeTSQL 558  Kazachstania ...
XP_002552039  475 AGKQNFSATHTalppfdkKNSSEFYFSGRMQELPQVNNVEQLIKVSHEWLSILGPHVAYDPVIVSKLCRIGLKDIeRSSR 554  Lachancea the...
Q754L4        468 GRLIYECLSPNvkekyllNTRYVFYYSCWADRLPVIGDVDGLFYHSHEILGLVGSKLSASPTLISMLSSIGVHDIlSSEN 547  Eremothecium ...
XP_003647570  469 PRLIHEYVSPNvserflfNVKYSFYYTEWTDKLPVLHNIEDLFRYSHQILGLLGPRLSVSSSVITKLNSIAVHDIeSSNN 548  Eremothecium ...
EPE02248      881 SDG---NRQRWFDLLQRLLVPALSLVPANPACVDAVWQLLQTFPLKQRYQLYTEWFEGATSRQPVMQKAFARTRRESLRI 957  Ophiostoma pi...
EDO18575      561 VEEt-nSVDIWVDYFRKFILPCIPLLEVNPTITTEIYELMKLFSFEKRYFMFNEMISKLSQDNLLIKLGFTKAEKEARST 639  Vanderwaltozy...
XP_003687075  563 DELrvsKIDKWIDYTRKFIMPTLPLLENCPSVATNIYELLSMFSFEKRYFLYNEVLSKLSKDDVNVKIGFNRAAREAKRL 642  Tetrapisispor...
CCC71112      564 STE---VIAKWIDYARKFLFPTIPVLGINPIAATEIYELMKYFPFERRYFMYNEMITKLSQDSLIIKVGFNKAERDAKNI 640  Naumovozyma c...
XP_003670864  591 STE---TIEKWVDYVRTFIFPTIPVLESNPMVTTEIYSIMKFFPFERRYFMYNEMMTKLSQDSLIIKVNFNKAEREAKVK 667  Naumovozyma d...
XP_003959429  542 DNSq--TIDKWTDYLRKFLFPTIPMEYTNPIVADEIYSLMSCFSFEKRYFIYNEMLTKTSQDSLILKANFNKSEREARSI 619  Kazachstania ...
CCK72019      559 KEE---STDRWIDYVRKFLLPMTSTEFSNSIVTSELFSLMTLFPVERRYFMYNEMITKLSQDNILVKIGFNKAARDAKSI 635  Kazachstania ...
XP_002552039  555 NPD---TLSIWLDFTRKFIFVSLPLLTDNLVVINEVFVLLQSFDFEKRYFLYNEMISKTSQDNVFVKAKWNESSREAKSA 631  Lachancea the...
Q754L4        548 SEL---VTEKWINYFRKFIFPALGGLEEDFIANINAYNLLKLFPFEKRYFLYHEMYSKISDSDIFVRLTFNKVQRKVRGL 624  Eremothecium ...
XP_003647570  549 SED---TIEMWINYFRKFIFPAIAAIEDDFVPNLSAYELMKRFPFEKRYFLYNEMYTKTSNDNVFVRLAFNKVGKRIKTL 625  Eremothecium ...
EPE02248      958 MRRISRENSSLMGR 971  Ophiostoma piceae UAMH 11346
EDO18575      640 LKSLSTDNIEfeai 653  Vanderwaltozyma polyspora DSM 70294
XP_003687075  643 LKVLNTDNIEQEAR 656  Tetrapisispora phaffii CBS 4417
CCC71112      641 LKALSTDTVDKEAR 654  Naumovozyma castellii CBS 4309
XP_003670864  668 LKILSTDTIDQEAR 681  Naumovozyma dairenensis CBS 421
XP_003959429  620 LKSLSTDTIDKESR 633  Kazachstania africana CBS 2517
CCK72019      636 LKSLSTDTISKESR 649  Kazachstania naganishii CBS 8797
XP_002552039  632 LKSLSNDNIGEKGR 645  Lachancea thermotolerans CBS 6340
Q754L4        625 LKSLSIDHIDDkvn 638  Eremothecium gossypii
XP_003647570  626 LKSLSIDDIAdkvn 639  Eremothecium cymbalariae DBVPG#7215
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