2BB6,4ZRQ


Conserved Protein Domain Family
Cobalamin_bind

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pfam01122: Cobalamin_bind (this model, PSSM-Id:395891 is obsolete and has been replaced by 460073)
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Eukaryotic cobalamin-binding protein
Statistics
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PSSM-Id: 395891
Aligned: 45 rows
Threshold Bit Score: 251.014
Created: 22-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2BB6_D         1 NICEITEVDSTLVERLGQRLLPWMDRLSQEqlNPSIYVGLRLSSLQAGAKEAHYLHSLKLSYQQSLlRPASNkddndsea 80  cattle
NP_001116703  17 KPC--ASDHETLLQSLNKQLLRSVDTQDNLp-NPSVHIALRLSTQHNLDKENQYLNRLKKEFHEDIeKSLRNgel----- 88  zebrafish
XP_023199669  17 KPCDTEGSNSELLLTLNRNLVHSLESPEGLp-NPSVHLGLRLSHHHNQAKETDHLNKLKNELHDDIqTSLSNsqa----- 90  southern platyfish
XP_005473430  19 IPCDTDGSNTELLLSLNKNLLRSLESQEGLp-NPSIHLALRLSKKHNLAKESEYLNRLKNELHNDIqSSLSNsqp----- 92  Nile tilapia
1_pfamImport  11 KPCATEGSNREFHLSLNKNLLRSLETQEGLp-NPSVHLALRLSDNHNPPKESEHLNRLKNLLHNDIqSSLSNsqs----- 84 
XP_005993347  20 TACDLPAEHTKLFLSLNKKLLRSLEDDSRVp-NPSIYLGLRLSGTHNLQMEKRYLQRLQQELEPSLgRDKSTlesk---- 94  coelacanth
Q5M8G1        32 NLCEIPEGNTRLIRSLNLKLLRSTIDNSGEp-NPSIYIGLRLSEDHSLEREADYLKKLKSSLETITaSSNTNnqeq---- 106 tropical clawed...
XP_001380461  19 QFCEIPPANSNLVVRVTQQLLGWMDRQSPLelNPSIYVGLRLSKQPSQDQDDFYLNSLMIHYQQSFsSLALEhqpk---- 94  gray short-tail...
XP_012399331  19 QLCQLPAASSDLVGTVTQQLLGWMARRAPSelNPSIYVGLRLSNQPPRDQDELYLSSLTVHYQESFsSLAPAhlr----- 93  Tasmanian devil
XP_008117996  20 QLCEIPPGNGHRVASLSAELLSLAHDATRAp-DPSLYLGLRLSERHSLEKERLYLERLQGVYQPNDsNDQVApryqe--- 95  green anole
2BB6_D        81 kpsmGQLALYLLALrANCEFIGG------RKGDRLVSQLKRFLEDEKRAIGHNHQGHpRTSYYQYSLGILALCVHQKRVH 154 cattle
NP_001116703  89 --vvGRLALYILALrSSCHDLSLhln-hnEKNEFLLTHLKKEMEEEKQNIAFSH--RpKTNYYQYSLGILALCVSGVRVS 163 zebrafish
XP_023199669  91 --vtGIMALYSLALkSSCYDLNTisftadDKSETLLTHLKRQMEQEKEHIGFSH--RpLTNYYQYSLGVLALCVSGIRVS 166 southern platyfish
XP_005473430  93 --vtGVLALYSLALkSSCYDLNTvsftvnERSQTLLTHLKNQMELEKEH--FTH--RpLTNYYQYSLGVLALCVSGIRVN 166 Nile tilapia
1_pfamImport  85 --vvGLLALYTLALkSSCYDLNTvtftvsEKSETLLTHLKKQMDDEKDNIAFSH--RpLTNYYQYSLGVLALCVSGIRVN 160
XP_005993347  95 -pttGLLSLYLLSLrASCLDMNT------AEANGLITQLKHKLHHEKEHIVQHK--RpQSNYYQYSLGILALCVNGKEVE 165 coelacanth
Q5M8G1       107 -pstGILALYLMALkSSCEDMEK------PERMRLITRLKHQLHKEKKHIVEKD--HpLTNYFQYSLGLVALCIHDKKVD 177 tropical clawed...
XP_001380461  95 -psmGQLALYLLAVrGGCRDIDT------RKGSMLVTQLKYYLEEEKHRIGHNHEGYpLTSYYQYSLSILALCIHNKKVP 167 gray short-tail...
XP_012399331  94 -ppmGQLALYLLAMrGGCKDMDT------RKGNLLVTQLKGYLEEEKHRIGHDHTGRpATSYYQYSLSILALCIHDKKVP 166 Tasmanian devil
XP_008117996  96 qpgtGRLALYLLALrGACHDMDT------PEAHRLVTQLKLHLHKEKAEIGPESLGRpLSNYYQYGLGLLALCVHGKMVD 169 green anole
2BB6_D       155 DSVVGKLlYAVEHKPHLLQDH---VSVDTMAMAGMAFSCLELS--NLNPKQRNRINLALKRVQEKILKAQTPEGYFGNVY 229 cattle
NP_001116703 164 THVSHKLiHAVEHGQIKHGES---LCIDSHAMAGMALQCLKNE--GISVKDEAELDKALATIKQKLVDSKRADGHMGNEF 238 zebrafish
XP_023199669 167 NHVSHKLiKAADNEHFKHGET---ESIDTYAMAGMALQCVKNS--GSYSHNAEELNLTLNKIKQKLLASRRSDGHIGNEF 241 southern platyfish
XP_005473430 167 NHVTNKLiKAAEHEQFTHGES---ESVDTYAMAGMALQCVKDT--GSHMQNAAGLNTALSKIKGKLLASRRTDGHIGNEF 241 Nile tilapia
1_pfamImport 161 NHVSNKLiKAVEMEHFKHGDEstgLALDTNAMAGMALQCVKDA--GSHVQNAAELDAALSQIKQKLLASRRDDGHIGNEF 238
XP_005993347 166 HHVVRKLiHAESHEGFLHGDA---LSIDTEAMAGLALRCLELSesRYNEELKSKIKVAIQSVRQKILQSQDKEGLFGNVF 242 coelacanth
Q5M8G1       178 EHVIQKLiNVEKKDGFVHGDT---LSVDTEAMAGLAFLCLKLSg-LYSPALTADINLAIDNVKQKIIKSKNAEGVFGNIY 253 tropical clawed...
XP_001380461 168 GHVVEKLlHAAEHNLFLHGSQ---FSVDTAAMASLTFSCLKDS--GLNPGLASRISRASKHLRNKILEEETPEGYFGNIY 242 gray short-tail...
XP_012399331 167 GHIVEKLlHAAQYDLLLRGSS---FSVDTAAMASLALSCLQAS--GLNPRLASGISRALEHLRNKILEEETPEGYLGNMY 241 Tasmanian devil
XP_008117996 170 GHVIHKLlHAEEHGRLGIHGK---LSVDTEAMAGLAFACLQRAa-FYPPELRAKLRQSVERVKGKILEGQTPAGAFGNIY 245 green anole
2BB6_D       230 STPLALQLLMGSLRPSVElgTACLKAKAALQASLQHKTFQNPLMISQLLPVLNQKSYVDLISPDCQAPRal--lEPAL-- 305 cattle
NP_001116703 239 STGLAVQALLAMGVEMEE----CGTAIEALRGDIRKGTYHNPMAASQVLPALYQQSYLHLKSKECRSEDdtltaD----- 309 zebrafish
XP_023199669 242 STGLAVQALLAMGSEVGD----CSASMEAMRTAARSNTYHNPMAISQTLPALQRKTYLSVKTLDCLNEDdtlvlEPVDpa 317 southern platyfish
XP_005473430 242 STGLAVQALLAMGSEVAE----CAASMEAMRTAARSNTYHNPMAISQTLPALQQTSYVAVKSKECLTEDntlvlEPLDpt 317 Nile tilapia
1_pfamImport 239 STGLAVQALIAMGSRVAE----CAASMEAMRTDARSNTYNNPMALSQILPALQHKSYLSIKSKECLNEDdtlvvEPIDpv 314
XP_005993347 243 STPVAVQALVAMEMTENR--DQCSKALGALVDAVRNGIFHNPMAMSTLNPVFHQKTYLDIRTMDCIAEEdgltlGPKRpg 320 coelacanth
Q5M8G1       254 STPLAVQFLSALGTSKDN--EECPKAISALLEAMKQGKFSNPMMMSQLMPVLHQKSYLDVANIKCTGNKdnlvlNPSTg- 330 tropical clawed...
XP_001380461 243 SSPLALQALMAAPLPESE--QACLRVGGALLKGLQAGAFQNPIPLSQLLPVLHHKTYLDLIQLDCNDKRvldplEEDA-- 318 gray short-tail...
XP_012399331 242 STPLALQALMEAPSPESE--RACLRVGDVLLKGLQEGAFQNPLPLSQLLPILHGRTYLSLRQLDCKDYRgl--lDVDL-- 315 Tasmanian devil
XP_008117996 246 SSPLAAQFLLAVGQSRKE--PECPKGMASLLRHLEQGDSPDVLFKSQLLPVLNGKSYLDIASVECHAETdglalGTPSp- 322 green anole
2BB6_D       306 ETPPQ 310 cattle
NP_001116703 310 VESAS 314 zebrafish
XP_023199669 318 VVLPS 322 southern platyfish
XP_005473430 318 VVPPN 322 Nile tilapia
1_pfamImport 315 VDSGS 319
XP_005993347 321 GDVAT 325 coelacanth
Q5M8G1       331 VLPDv 335 tropical clawed frog
XP_001380461 319 TTPQT 323 gray short-tailed opossum
XP_012399331 316 ITPPA 320 Tasmanian devil
XP_008117996 323 TLPQP 327 green anole
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