Conserved Protein Domain Family
7tmA_OR52K-like

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cd15948: 7tmA_OR52K-like 
olfactory receptor subfamily 52K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
This group includes human olfactory receptor subfamily 52K and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.
Statistics
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PSSM-Id: 320614
Aligned: 4 rows
Threshold Bit Score: 478.245
Created: 17-Dec-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                 #  ##           ###### 
Q8NGK4        26 HAWISIPFCFAYTLALLGNCTLLFIIQADAALHePMYLFLAMLATIDLVLSSTTLPKMLAIFWfrdQEINffaCLVQMFF 105 human
XP_006126625  10 HLWISIPFCSVFSVALLGNCTLLYVIRTEPSLHkPMFYFLAMLAVIDLGLSTTTVPKILSIFWfnsREINfsaCLVQMFF 89  Chinese soft-sh...
ELW71810      10 HVWISIPFCSAYILALLGNCTLLFIIHADAALHePMYLFLAMLAVIDLVLSSSTVPKMLGIFWirdREINfyaCLVQMFF 89  Chinese tree shrew
XP_007071438  32 HPWISIPFCSMFTVALLGNVTLLYVIKTEPSLHqPMFYFLAMLAVIDLVLSTTTVPKILSIFWfnsREISfnaCLVQMFF 111 green sea turtle
Feature 1        ##  #                                            # #####                        
Q8NGK4       106 LHSFSiMESAVLLAMAFDRYVAICKPLHYTTVLTGSLITKIGMAAVARAVTLMTPLPFLLrRFHYCRGpVIAHCYCEHMA 185 human
XP_006126625  90 LHSFSiMESAVLLAMAFDRYVAICNPLRYATILTNSVIVKIGLAALARAVVLMTPLPFLLqRLPYCRShVIAHCYCEHMA 169 Chinese soft-sh...
ELW71810      90 LHSFSiMESAMLLAMAFDRYVAICKPLHYTTVLTGSLITKIGMAAVARAVTLMTPLPFLLrRFHYCRGpVIAHCYCEHMA 169 Chinese tree shrew
XP_007071438 112 LHSFStLESTLLLAMAFDRYVAICNPLRYATILTNSVIAKIGLAALARAVLLVVPLPFLVrRLPYCGShVISHCYCEHMA 191 green sea turtle
Feature 1                   #  ### ### ##                                            #  ## ##  # 
Q8NGK4       186 VVRLACGDtSFNNIYGIAVAMFIVVLDLLFVILSYVFILQAVLQLasqEARYKAFGTCVSHIGAILSTYTPVVISSVMHR 265 human
XP_006126625 170 VVKLACTDtTFNNIYGIIVALCIVGLDLMFIIVSYVRILRAVFSLaskEEQLKAFGTCGSHICAILVFYVPVVLSSTVHR 249 Chinese soft-sh...
ELW71810     170 VVRLACGDtRFNNIYGIAVAMFIVVLDLLFVILSYIFILRAVLQLasqEARYKAFGTCVSHIGAILAFYTPVVISSVMHR 249 Chinese tree shrew
XP_007071438 192 VVKLACADtRVNNVYGIMVVLFIAGLDLMFISLSYVNILRAVLSLaskEEQLKAFGTCGSHLCAILVFYIPVVLSSTIHR 271 green sea turtle
Feature 1              ## ###  #  ##                  
Q8NGK4       266 VArhAAPRVHILLAIFYLLFPPMVNPIIYGVKTKQIR 302 human
XP_006126625 250 FGrqVAPHVHILMANFYLLFPPMMNPIVYGVKTKQIR 286 Chinese soft-shelled turtle
ELW71810     250 VArrAAPHVHILLANFYLLFPPMVNPIIYGVKTKQIR 286 Chinese tree shrew
XP_007071438 272 FRrhVAPHVHILLANFYLLFPPMMNPIVYGVKTKQIR 308 green sea turtle

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