Conserved Protein Domain Family
PaaSYMP

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pfam14738: PaaSYMP (this model, PSSM-Id:405435 is obsolete and has been replaced by 464290)
Solute carrier (proton/amino acid symporter), TRAMD3 or PAT1
PAT1 (proton amino acid transporter 1), also known as TRAMD3 of AAT-1, is the molecular correlate of the intestinal imino acid carrier. It is a proton-amino acid co-transporter having a stoichiometry of 1:1. Due to its mechanism, PAT1 activity increases at acidic pH, which correlates well with the acidic micro-climate close to the brush-border in the intestine. Glycine, proline, and alanine are the preferred substrates of the transporter. The maximum velocity is similar for the three substrates. All substrates are transported with low affinity, showing Km values in the range of 2-10 mM. The transporter does not discriminate between L- and D-isoforms of these amino acids; in addition, beta-alanine is transported with similar affinity as alpha-alanine. Similar to the IMINO transporter, the amino acid analog MeAIB is recognized by PAT1. The transporter is strongly expressed in the small intestine, colon, kidney, and brain.
Statistics
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PSSM-Id: 405435
Aligned: 50 rows
Threshold Bit Score: 123.051
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:MICPUN_101640  220 TQSLYRESEAQTAPYEPEYFVPd-PNeRtakqaalaernateggaPELLSIRHLTFASGlPAGAAEAEHIEKMRAKRAFE 298  Micromon...
Q17PH5             141 SQTMYRESSAQTQPWMPTAVLKdsDIgT-----------------AEIVYVAEMLQHTR-YPGINEVEIIERARKKRNWE 202  yellow f...
Q9VJC4             166 TQTLYRESSAQTLAFLPEILNKdkSEt------------------FELYTLAKLLPGDK-PPGLHEVEFLERARRRWKFS 226  fruit fly
EDW55576           139 TQTLYRESSAQTMAYLPEIFEPnsVEt------------------LELFSLPSIFPVAN-RPGLHEVEILERARKRWAFS 199  Drosophi...
XP_001961693       164 TQTLYRESSAQTLAYLPEIQEAe-KSqK-----------------LELFSLSQVLPGDK-PPGLQEVEILERSRRRWLFR 224  Drosophi...
XP_002038932       149 TQTLYRESSAQTLAYLPEIYDDdeARt------------------LELFTLPSVLPGDK-PPGLYEVEVFERARRRHKFL 209  Drosophi...
EDW39774           161 TQTLYREASAQTLAYLPETEDKeiDEh------------------LELFRLASALPGDK-PPGLYEVEVLERSRKRWAFN 221  Drosophi...
XP_002020784       165 TQTLYRESSAQTVAYLPEIMDKeiDEh------------------LELFCLPSLLPGDK-PPGLHEVEILERARKRWAFN 225  Drosophi...
XP_002066311       160 TQTLYRESSAQTVAYLPDVMDK--EIvDg----------------LELFNLSAILPGDK-PPGLYEVEVLERARKRWAFN 220  Drosophi...
EDW04125           176 TQTLYRESSAQTVAYLPDIMDKeqDEh------------------LELFNLATLLPGDK-PPGLNEVEILERARKRWAFN 236  Drosophi...
jgi:MICPUN_101640  299 ASLP--------PLSDAASLPLRKKLMEEWEEAEWAEREMEIARLQEERLDILRRAIDAREEKAERVAEARLRRVRDGML 370  Micromon...
Q17PH5             203 YSMG--------SCDSADEWAQQKLVLQIFEWEEWVARERQIDRYQMLRLQLVAKIMNKRERDTKQATESKMENTKNRIN 274  yellow f...
Q9VJC4             227 KALKdnfkrllcEAREVSIKTQYKEILEAFEWEQWIQREEDIQQCQMMRLEIVIKMFDKREKEMHNASKARIEKSVQQIE 306  fruit fly
EDW55576           200 DALKvhfknllqDARKVAIKTELKDILEAIEWEQWIQREEDIQECQMMRLQIVIKMFDKREKEIHAASKTRIETACERIE 279  Drosophi...
XP_001961693       225 DALKhnfqslfnEAREFEIKTKYKPILEAFEWEQWIEREESIQECQMMRLEIVIKMFNKREKEMHASSNARIEQACERIE 304  Drosophi...
XP_002038932       210 DALKlqikhqrhHDQKLDF-NRYKMMAEAFEWEHWMEREERIQECQMMRLEIVIKMFDKREREMHAASKTRIEQGCEKIE 288  Drosophi...
EDW39774           222 KALNtnlkrqlqEARELAMETKYKSILEAFEWESWIEREECIQECQKRRLEIVIKMFDKREKEMHLSSKKRIEMACEGIA 301  Drosophi...
XP_002020784       226 KAVKtnfmkqlhAARELTMQTKYKHILEAFEWESWIEREEYIQECQMMRLEIVIKMFDKREKEMHLASKTRIEIACERIE 305  Drosophi...
XP_002066311       221 EALKtnfsrkmqDARKEAMNNKYKSIFEAFEWEHWIQREEYIQECQMMRLEIVIRMFDKREKEMHEASKTRIEMACERIE 300  Drosophi...
EDW04125           237 QALKtsfrrqlhEAREKAIKSKYRPILEAFEWEHWMEREEYIQECQMMRLEIVIRMFDKREKQMHAESKTRIEVACEGIE 316  Drosophi...
jgi:MICPUN_101640  371 SEKHKKFAAIQAKRLKALRK 390  Micromonas commoda
Q17PH5             275 EQRNKAMEKLKINYERNMRK 294  yellow fever mosquito
Q9VJC4             307 KRRQDGLRKNEIEYQRGMRR 326  fruit fly
EDW55576           280 QRREAGLRKNEIEFQRGMRR 299  Drosophila sechellia
XP_001961693       305 KRRQAGLRKNEIEYQRGMRR 324  Drosophila ananassae
XP_002038932       289 KRRKAALRKNEIEYQRGMRR 308  Drosophila sechellia
EDW39774           302 ERRQAALHKNEIEYQRGKRR 321  Drosophila persimilis
XP_002020784       306 KRRQEGLHKNKMEYLRG--K 323  Drosophila persimilis
XP_002066311       301 KKRRIGLQKNEIEYQRGMRR 320  Drosophila willistoni
EDW04125           317 QKRQRGLAKNEVEYQRAMRR 336  Drosophila grimshawi
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