Conserved Protein Domain Family
LINES_N

?
pfam14694: LINES_N (this model, PSSM-Id:405394 is obsolete and has been replaced by 464266)
Lines N-terminus
This family represents the N-terminus of protein lines. In Drosophila this protein is involved in embryonic segmentation and may function as a transcriptional regulator.
Statistics
?
PSSM-Id: 405394
Aligned: 24 rows
Threshold Bit Score: 296.131
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
XP_002005702 448 HVVALTDSESFDTTHLKCVTIQKLEHKWPTLVKHMSELM-APVHQDSAEHC------------VLNFLQLWENIISVKAN 514 Drosophila moja...
EFN64138     202 nTHIISDTESFDSTAIKEMCVKALESKWTILVSKFKIILrTYTPQHASV--------------VITFLHLWETIISVKAN 267 Florida carpent...
NP_001127865 203 nVITISDPESLDSTPVKAMCVKALESKWTVLVTKFDAILgSYTPQHESA--------------VITFLNLWESIISVKAN 268 jewel wasp
XP_014248050 213 hVLSVSDPDSLDSSQIKCLCIKALEAKWPAIVSRFDRLLaTSPAQNDST--------------VITFLGLWEAIISVKAN 278 bed bug
EFA11357     285 vsVPYSDAESYDTSGIKGLIIKSLEAKWPELISKIQYLI-TQNNSIEAQTC------------VLTFLSLWESTISVKAN 351 red flour beetle
Q16SZ3       275 HIISLTDSESFDTTRIKCETVNHLGKKWPALVEVVSRMIkALLTAIATETC------------ILTFLRLWESIISVKAN 342 yellow fever mo...
XP_022525247 164 SLTEVIKGILRGECANKPEILRKLLAGFEEVLTSLFFKMlLHDAFENSQVAenitd---ldvtVSTFMDLLEALCAARPR 240 Mexican tetra
XP_015198441 184 SLTFVIKGLLRGVFQQKMEILGKLLTSLDLVFPALHSMMf-SFADFSQELStsskyefgfetsLASFIDLIEVLIAARTK 262 spotted gar
XP_005990207 229 SLTAVIKAILKDKTFKKTEVLKNLFTNLDTVFENLYNHMfPQCSKDSKQIMsntksqfetvnnLISFIDLLEVLVACRTQ 308 coelacanth
KAE8618347   168 tlicvFKGLLRDENLQQGDILSVLLQPLDPTFERFCSSLlSDVGTTHCQTSaldpe---ssccLSCLLDLMELLIALRIK 244 tropical clawed...
XP_002005702 515 LSI---DETRPFYAQLDKFELLLNHNLSCTVYKQMLCLFNEALCYGS-----------TLALQDMLPEETCRLAHQIVCH 580 Drosophila moja...
EFN64138     268 LSV---IDTKPFYSKLNDLVWLLNSNLPSVVWRHLLSLFNEVLCYGS-----------TLALQDMLPDEPCSLATLIVRV 333 Florida carpent...
NP_001127865 269 LSV---IDTKLFYSQLDNLVMLLNANVPGIIWRHLIGLFNEVLCYGS-----------TLSLQGILPEEPCLLAHVVVRA 334 jewel wasp
XP_014248050 279 LSI---VDTKPFYAHLANFVALLNSGVSPIVWKHMLDLFNEVLCYGS-----------TLALQDILAEEPCSLAHLIVRS 344 bed bug
EFA11357     352 LSV---IDTKPFYAHLENFVGLLNSNLPPIIWKQLLSLFNEVLCYGS-----------TLALQDMLPEDTCQLAHLIVRY 417 red flour beetle
Q16SZ3       343 LSV---VETQPFHAQLDHFQLLLLSTKNSVIYKQMLTLFNEALCYGS-----------TLALQDFIPDEVGSLAHNVVRC 408 yellow fever mo...
XP_022525247 241 YGVc-sTVQRLMFLHSSVLLRLMDSCLGYFVKKRVLLLLKRTVVQRPgedwalgdrhsALQEDEFLAGDMLVLADAVLQE 319 Mexican tetra
XP_015198441 263 LKTl-aSSQRLLFIQASLALQLVGSPVHCSVKKKMLLLLKRCLLQKAgedfsigqvkgSLLRDDILDSDMLMLATAVLQS 341 spotted gar
XP_005990207 309 LSLh-yLCQRLLFLQASQPLEFMTSLGDYMIKKKLILLLKKCVLHKAgedfisgslhaVSQQLPCLNEDVLVLANAIFHA 387 coelacanth
KAE8618347   245 YKRslpLCHTVLSVTIPQAFTLVSSPVAYYVKRQFILVLKRSLLKKAgedfypvlhsmSQPGDPVLEQEITMLVLALLNS 324 tropical clawed...
XP_002005702 581 VrSLRILESLPRRQPQ-----NIVGligyngapvnyvpgtllahnslpahegTEAAAAGSVGLIEMDKTLLQKMVLLVLK 655 Drosophila moja...
EFN64138     334 VkDHRLLDALPYRHGS-----GRFG-----------------------------------GGTGDGDRPLLQKMVLLVLK 373 Florida carpent...
NP_001127865 335 VkDWRLLDSLPYRHGS-----GRFG-----------------------------------GGSGDGDHPLLQKVVLLVLK 374 jewel wasp
XP_014248050 345 VkDWRLLEAIPFRGGS-----GRFG-----------------------------------GGSGDGDKPLLQKAVLLVLK 384 bed bug
EFA11357     418 VkDFRLLDSLPYRRSEgytvnSFVG-----------------------------TIPSTQPTQSNIDKTLLQKMTLLVLK 468 red flour beetle
Q16SZ3       409 VkDHRILDKMPKSTYT-----SPLGflgykgeiiryh---dnrlsssssgasSSNRAAATVITCGYDRTLMQKMALLVLK 480 yellow fever mo...
XP_022525247 320 V-AAGWFRRVWVKPQP-----SFLG---------------------------GNRQKFPEGE--GKDVVMLRATSLILIK 364 Mexican tetra
XP_015198441 342 P-FSGWLQSVSVSSNP-----SYFG---------------------------GTSIV-GENVLGSADCVMLRAAILTLIK 387 spotted gar
XP_005990207 388 V-MSGWLQQVPVSPKG-----SLFG---------------------------GSELLSEDITR-RPDLTMLRAISLMVIK 433 coelacanth
KAE8618347   325 V-DQGWLLQVPIRDRI-----SSFG---------------------------GSYMASES----SPDLVVLGAVCLSVLK 367 tropical clawed...
XP_002005702 656 SIAVTVKEIRS-DSSdssidstdydafqdiqlIERSIRDVLSKLETFIKQTLE-----FHpecHFSKILIHLFDDQDDHL 729 Drosophila moja...
EFN64138     374 SAAVTVRETRS-DSSdssldseaedldedmavIDRSIREVLRQLDQCVKALMP-----FHpemPLSQWVVQMFHDQDDFL 447 Florida carpent...
NP_001127865 375 SVAVTMRETRSdSSSdsslasdtedldadmviIERSIRGVLRQLDQCVKQLMP-----FHpemPLSQWVVRMFNDQDDFL 449 jewel wasp
XP_014248050 385 AVAVTVKETRCeSSSdssvcsesedadadmavIERSIREVLRQLDNCVKTLLP-----FHpetPLAQWVVQLFSDQDDAL 459 bed bug
EFA11357     469 SVAITIKETRS-DSSdssvgsedydfshdmqlIARSIRDVLKKVDVFIKLSLE-----FHpetPFSKILIHLFSDQDDYM 542 red flour beetle
Q16SZ3       481 AVAVIVKEIRC-DSSdssvdssd-fdmqeiqmIERSIRDVVRKLETFLKVQLE-----FHpdnHFSKVLIHLFDDQDDYL 553 yellow fever mo...
XP_022525247 365 SLQIRTQHAGTeESE-----------------RALHVQEYLLELLAFLQQRVAq----FKgepHSCSWILMVFAEQDDDM 423 Mexican tetra
XP_015198441 388 SLEYKVLH--A-GSV-----------------PGFEIQGYLPSLMLFLKKHLNateqqLC---HPCSWVSVVFLDQDDDM 444 spotted gar
XP_005990207 434 ALEIKILNLAA-GDD-----------------PRAELLGFMPQLMTFVGKHLKspqefL----HPCTWVSLVFLEHDEDM 491 coelacanth
KAE8618347   368 ALEIQLLEVTL-SSI-----------------IAEKLQSVMDQLLAFLRHHLG-----WQkpwHPCEWVSLVFIEQDDDM 424 tropical clawed...
XP_002005702 730 IEAMVCTLDVTSGISFR-NNAFPELV--------------AMLN---PVYTFLEFLKMASNSSDLLLDLLVSNETCFLLY 791 Drosophila moja...
EFN64138     448 IEGMVCCLDVAVGLFYRgSPNGPVSR--------------SVLSplrPTLTFVQFIHVVAHDPDVLLDLLVSNETCFLLY 513 Florida carpent...
NP_001127865 450 IEGMVCCLDVANGLFYRgPPQNTDLA--------------NMLS---PTLTFVQFIKAVSNHHEVLLDFLISNETCFLLY 512 jewel wasp
XP_014248050 460 IEGMVCCLDVSVGLFHR-ENASQDLR--------------RALS---PAISLAQFLRTVSHGSDVLLDFLVSNETCFLLY 521 bed bug
EFA11357     543 IEAMVCTLDIKTGISYQ-NALAPDFI--------------AMLN---PVHSFIEFLKIVSHDSDVLLDYLVSNETCFLLY 604 red flour beetle
Q16SZ3       554 VEAMVCTLDVTSGISFR-NNAFPELI--------------AILN---PVYTFIEFSNLGPNITHLFLDLLISTETCFLLY 615 yellow fever mo...
XP_022525247 424 MEALKTLTSLYL-FQRS----TSSSGcda---------cswGCN---PHCHFILLLQSLCFDHTVLLDFLISTETCFLEY 486 Mexican tetra
XP_015198441 445 MEAAKAMLTLYLHFRRV-----SNTEvcdaelf-vqltheYGCN---PHCHFLFFLNSVAFDHTVLLDFLISTETCFLEY 515 spotted gar
XP_005990207 492 LEAAKALLTIYVHFDRF-----KTKSdhknemw-shvthrQGYN---PHCIFLLLLKNILFDHRVLLDFLISTETCFLEY 562 coelacanth
KAE8618347   425 LEVANILLKMYLRCQNFwSQVPVCVNpgnemgiwdgishqFGCD---PNCIFVLLLNSVAFDTSVLLDFLISSETCFLEY 501 tropical clawed...
XP_002005702 792 LLRFLKYIRMNWTMFVHSC 810 Drosophila mojavensis
EFN64138     514 LLRFLKYIRRNWGEFVECC 532 Florida carpenter ant
NP_001127865 513 LLKFLKYIKRSWPEFVSCC 531 jewel wasp
XP_014248050 522 LLRLLKYIRRNWHEFASTC 540 bed bug
EFA11357     605 LLRFLKYTRRNWDVFVNSC 623 red flour beetle
Q16SZ3       616 LLRFLKYARQNWSMFTQSC 634 yellow fever mosquito
XP_022525247 487 CVLYLKLLRDNWRDFSDSC 505 Mexican tetra
XP_015198441 516 FVGYLKILRENWQDFCYIC 534 spotted gar
XP_005990207 563 FVRYLKFLREDWDQFCSTC 581 coelacanth
KAE8618347   502 FVRYLKLLKEDWPRFCLTC 520 tropical clawed frog
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap